RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SAE1Q9UBE0 346 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 UBQLN2Q9UHD9 624 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 A0A1W2PPW3 197 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 BANF1O75531 89 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 ERBB2P04626 1255 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 HNRNPLP14866 589 aaKnown RBP eCLIP11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 PSMB4P28070 264 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 CACNB3P54284 484 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 RPL38P63173 70 aaKnown RBP11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZYG11AQ6WRX3 759 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 USP7Q93009 1102 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 UBE2E3Q969T4 207 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
CSPG4P12-201ENST00000558282 KLF11O14901 512 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 PLIN3O60664 434 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 IFNA6P05013 189 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 IL7P13232 177 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 FMO1Q01740 532 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 BAATQ14032 418 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 NUDT18Q6ZVK8 323 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 GALNT5Q7Z7M9 940 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 C15orf40Q8WUR7 153 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 MSANTD3Q96H12 275 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF607Q96SK3 696 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 RIOX1Q9H6W3 641 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 TLR8Q9NR97 1041 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 TSPAN16Q9UKR8 245 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 OAS3Q9Y6K5 1087 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 GAKO14976 1311 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 FADS2P1A8MWK0 482 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 CHURC1-FNTBB4DL54 471 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ABCB7O75027 752 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 OR6A2O95222 327 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 TRUB2O95900 331 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 C2P06681 752 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 IL32P24001 234 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 TMEM44Q2T9K0 475 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 KLHL35Q6PF15 583 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ITPAQ9BY32 194 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 H3BM21 787 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 L7N2F9 121 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 MAGEB3O15480 346 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ALDH4A1P30038 563 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 CYP2C18P33260 490 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 COL15A1P39059 1388 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 PTGIRP43119 386 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ALDH9A1P49189 494 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 PPP4CP60510 307 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 RAB5BP61020 215 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 LSM12Q3MHD2 195 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 SHQ1Q6PI26 577 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ADAMTSL2Q86TH1 951 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 GPR65Q8IYL9 337 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC39A3Q9BRY0 314 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 CEP41Q9BYV8 373 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 RANBP3Q9H6Z4 567 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF696Q9H7X3 374 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 PIH1D1Q9NWS0 290 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 U3KQV3 271 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 DPYSL4O14531 572 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 EI24O14681 340 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 AOC1P19801 751 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC6A2P23975 617 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 GRSF1Q12849 480 aaKnown RBP eCLIP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 HGSNATQ68CP4 663 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC37A3Q8NCC5 494 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 HDAC10Q969S8 669 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 BBS4Q96RK4 519 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 OMDQ99983 421 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 SLC30A2Q9BRI3 323 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 DPAGT1Q9H3H5 408 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 HPF1Q9NWY4 346 aa11.74□□□□□ -0.53
CSPG4P12-201ENST00000558282 C12orf71A8MTZ7 269 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 ATP6AP2O75787 350 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 IPO13O94829 963 aaKnown RBP11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 MICAL2O94851 1124 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 FGRP09769 529 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 OR56A5P0C7T3 313 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 ACSL1P33121 698 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 MPP2Q14168 576 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 BTBD16Q32M84 506 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 SPATS1Q496A3 300 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 EMC10Q5UCC4 262 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 ADNP2Q6IQ32 1131 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 DNAJB8Q8NHS0 232 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZFP28Q8NHY6 868 aa11.73□□□□□ -0.53
CSPG4P12-201ENST00000558282 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms