RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 BEAN1Q3B7T3 259 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 RNASE12Q5GAN4 147 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 DNTTIP2Q5QJE6 756 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 TMEM198Q66K66 360 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 TMEM65Q6PI78 240 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 ZNF474Q6S9Z5 364 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 C15orf39Q6ZRI6 1047 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 DCDC5Q6ZRR9 648 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 KCTD9Q7L273 389 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 MIER3Q7Z3K6 550 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 ABI3BPQ7Z7G0 1075 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 TSPAN33Q86UF1 283 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 CNTN4Q8IWV2 1026 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 TBC1D21Q8IYX1 336 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 LNX2Q8N448 690 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 AFAP1Q8N556 730 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 TMEM217Q8N7C4 229 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 MRPL43Q8N983 215 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 KDM1BQ8NB78 822 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 OR7G3Q8NG95 312 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 RASSF8Q8NHQ8 419 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 C9orf43Q8TAL5 461 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 FBXO30Q8TB52 745 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 ST7LQ8TDW4 575 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 HDAC7Q8WUI4 952 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 ROBO4Q8WZ75 1007 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 IP6K1Q92551 441 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 DNASE1L2Q92874 299 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 RFKQ969G6 155 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 DACT3Q96B18 629 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 FBXL8Q96CD0 374 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 SPACA9Q96E40 222 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 EEF2KMTQ96G04 330 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 VPS39Q96JC1 886 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 HNRNPABQ99729 332 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 ANP32EQ9BTT0 268 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 CACNG6Q9BXT2 260 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 FRMD8Q9BZ67 464 aaPredicted RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 TKTL2Q9H0I9 626 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 KCNK15Q9H427 330 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 C17orf75Q9HAS0 396 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 DNAJC17Q9NVM6 304 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 COMMD8Q9NX08 183 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 GAR1Q9NY12 217 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 DLL3Q9NYJ7 618 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 NINJ2Q9NZG7 142 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 LARSQ9P2J5 1176 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 TESQ9UGI8 421 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 FETUBQ9UGM5 382 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 ITGA11Q9UKX5 1188 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 STX8Q9UNK0 236 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 AURKCQ9UQB9 309 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 LSM4Q9Y4Z0 139 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 CEPT1Q9Y6K0 416 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.83□□□□□ -1.8
TDP1-217ENST00000557782 MST1RQ04912 1400 aa3.83□□□□□ -1.8
TDP1-217ENST00000557782 A0A096LPK6 155 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 C1orf226A1L170 272 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 WDR27A2RRH5 827 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HSPB2A8KAH6 182 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 EIF3DO15371 548 aaKnown RBP eCLIP3.82□□□□□ -1.8
TDP1-217ENST00000557782 PEX1O43933 1283 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ATP2C2O75185 946 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ZWINTO95229 277 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 NDUFA10O95299 355 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TRIM16O95361 564 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 MT-CO3P00414 261 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 RLN1P04808 185 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ALPPP05187 535 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 OR52Z1P0C646 297 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ALPPL2P10696 532 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 FERP16591 822 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 MYF6P23409 242 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 DNASE1P24855 282 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CDC25CP30307 473 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HIBADHP31937 336 aaKnown RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 SHMT1P34896 483 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CTNNB1P35222 781 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CRKLP46109 303 aaKnown RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 GPR12P47775 334 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CENPAP49450 140 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CLCNKBP51801 687 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ZNF75DP51815 510 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 SLURP1P55000 103 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CASP9P55211 416 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CDH13P55290 713 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 NME5P56597 212 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 EEFSECP57772 596 aaKnown RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 SORDQ00796 357 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ACSM1Q08AH1 577 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ITGADQ13349 1161 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 NAE1Q13564 534 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HSPB2Q16082 182 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 PKN1Q16512 942 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 SMN1Q16637 294 aaKnown RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 TXNRD1Q16881 649 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 WSCD2Q2TBF2 565 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 MDH1BQ5I0G3 518 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TBC1D9BQ66K14 1250 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms