RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ZSWIM9Q86XI8 627 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 GKN2Q86XP6 184 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 ATL2Q8NHH9 583 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 MAML1Q92585 1016 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 HAUS1Q96CS2 278 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 TMEM74Q96NL1 305 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 FAM117AQ9C073 453 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 CLPBQ9H078 707 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
NEK9-211ENST00000557673 HEMK1Q9Y5R4 338 aaPredicted RBP16.66■□□□□ 0.26
NEK9-211ENST00000557673 RASGRP1O95267 797 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 WISP1O95388 367 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 PDX1P52945 283 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 INHBCP55103 352 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 SLC10A7Q0GE19 358 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 KLF1Q13351 362 aaPredicted RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 ZNF235Q14590 738 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 LBRQ14739 615 aaKnown RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 LRRC14Q15048 493 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 PDK1Q15118 436 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 PRKD1Q15139 912 aaPredicted RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 NOMO1Q15155 1222 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 ZNF569Q5MCW4 686 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 SLC35F6Q8N357 371 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 TP53I13Q8NBR0 393 aaPredicted RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 ZNF641Q96N77 438 aaPredicted RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 PSKH2Q96QS6 385 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 TUBGCP5Q96RT8 1024 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 SAE1Q9UBE0 346 aaPredicted RBP16.65■□□□□ 0.26
NEK9-211ENST00000557673 ACSL6Q9UKU0 697 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 GPR34Q9UPC5 381 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 LRRK1Q38SD2 2015 aa16.65■□□□□ 0.26
NEK9-211ENST00000557673 PMS2P1A4D2B8 440 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 D6RAR5 112 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 TJP3O95049 919 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 ITGB2P05107 769 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 PRKCGP05129 697 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 JMJD7P0C870 316 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 CCNCP24863 283 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 SLC5A2P31639 672 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 UGT1A5P35504 534 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 CSNK1DP48730 415 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 GRM3Q14832 879 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 UGP2Q16851 508 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 CFAP58Q5T655 872 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 USP53Q70EK8 1073 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 PRICKLE2Q7Z3G6 844 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 JAMLQ86YT9 394 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 HID1Q8IV36 788 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 CCDC13Q8IYE1 715 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 TEX26Q8N6G2 289 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 HCAR2Q8TDS4 363 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 NSMCE1Q8WV22 266 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 P3H4Q92791 437 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 CCDC74AQ96AQ1 378 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 TMEM159Q96B96 161 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 NSMCE3Q96MG7 304 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 QKIQ96PU8 341 aaKnown RBP eCLIP16.64■□□□□ 0.25
NEK9-211ENST00000557673 MGME1Q9BQP7 344 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 ARHGAP9Q9BRR9 750 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 BRD8Q9H0E9 1235 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 ATP13A3Q9H7F0 1226 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 PCDH12Q9NPG4 1184 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 MBNL1Q9NR56 388 aaKnown RBP16.64■□□□□ 0.25
NEK9-211ENST00000557673 SIRPGQ9P1W8 387 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 PNMA8BQ9ULN7 279 aaPredicted RBP16.64■□□□□ 0.25
NEK9-211ENST00000557673 JRKLQ9Y4A0 524 aa16.64■□□□□ 0.25
NEK9-211ENST00000557673 SPTA1P02549 2419 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 TTC24A2A3L6 582 aaPredicted RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 MATN3O15232 486 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 NVLO15381 856 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 RPLP0P05388 317 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 SFTPCP11686 197 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 SERPINA4P29622 427 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 CCKBRP32239 447 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 HSPA9P38646 679 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 MMP13P45452 471 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 IFI35P80217 286 aaPredicted RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 OTUD4Q01804 1114 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 IRF4Q15306 451 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 TMEM52BQ4KMG9 183 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 CCDC181Q5TID7 509 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 BRAT1Q6PJG6 821 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 BZW1Q7L1Q6 419 aaKnown RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
NEK9-211ENST00000557673 PGBD5Q8N414 524 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 KYQ8NBH2 561 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 CCNYQ8ND76 341 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 ACTL9Q8TC94 416 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 SGF29Q96ES7 293 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 COQ6Q9Y2Z9 468 aa16.63■□□□□ 0.25
NEK9-211ENST00000557673 COL27A1Q8IZC6 1860 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms