RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ZDHHC18Q9NUE0 388 aa15.23■□□□□ 0.03
NEDD1-213ENST00000557644 FKBPLQ9UIM3 349 aa15.23■□□□□ 0.03
NEDD1-213ENST00000557644 DMTF1Q9Y222 760 aa15.23■□□□□ 0.03
NEDD1-213ENST00000557644 HCN4Q9Y3Q4 1203 aa15.23■□□□□ 0.03
NEDD1-213ENST00000557644 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
NEDD1-213ENST00000557644 SMAPO00193 183 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 SOD1P00441 154 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 NMBRP28336 390 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 AKT2P31751 481 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 ARSDP51689 593 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 INPP5AQ14642 412 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 HENMT1Q5T8I9 393 aaKnown RBP15.22■□□□□ 0.03
NEDD1-213ENST00000557644 ESRP1Q6NXG1 681 aaKnown RBP15.22■□□□□ 0.03
NEDD1-213ENST00000557644 FAM151BQ6UXP7 276 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 GCNT7Q6ZNI0 430 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 IGDCC3Q8IVU1 814 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 PDIK1LQ8N165 341 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 SUMF1Q8NBK3 374 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 OR13J1Q8NGT2 312 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 MFSD3Q96ES6 412 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 BMFQ96LC9 184 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 TM9SF3Q9HD45 589 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 AASDHPPTQ9NRN7 309 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 PILRBQ9UKJ0 227 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 MAD1L1Q9Y6D9 718 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 GAPDHSO14556 408 aaPredicted RBP15.22■□□□□ 0.03
NEDD1-213ENST00000557644 ARL4CP56559 192 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 FASTKD3Q14CZ7 662 aaKnown RBP15.22■□□□□ 0.03
NEDD1-213ENST00000557644 CCDC6Q16204 474 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 TSTD2Q5T7W7 516 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 NRSN1Q8IZ57 195 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 STYXQ8WUJ0 223 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 KIFC1Q9BW19 673 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 PLXNA2O75051 1894 aa15.22■□□□□ 0.03
NEDD1-213ENST00000557644 WNT1P04628 370 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 ECHS1P30084 290 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 PDE1BQ01064 536 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SMAD1Q15797 465 aaKnown RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 RAET1GQ6H3X3 334 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 PNCKQ6P2M8 343 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 TBATAQ96M53 351 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SPATA16Q9BXB7 569 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 NLE1Q9NVX2 485 aaPredicted RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 RAB23Q9ULC3 237 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SOX13Q9UN79 622 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SCN8AQ9UQD0 1980 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 FPGTO14772 594 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 NDC80O14777 642 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 BCAT2O15382 392 aaPredicted RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 CA5AP35218 305 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 NUDT1P36639 197 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SPAM1P38567 509 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 NBL1P41271 181 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 DCDC1P59894 354 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 RACK1P63244 317 aaKnown RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 DPTQ07507 201 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 PDIA2Q13087 525 aaKnown RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 STAT4Q14765 748 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 ANKMY2Q8IV38 441 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 DENND6BQ8NEG7 585 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 FUBP1Q96AE4 644 aaKnown RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 FRMD8Q9BZ67 464 aaPredicted RBP15.21■□□□□ 0.03
NEDD1-213ENST00000557644 IRF2BPLQ9H1B7 796 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SEMA4AQ9H3S1 761 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 TREX1Q9NSU2 369 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 SAMD15Q9P1V8 674 aa15.21■□□□□ 0.03
NEDD1-213ENST00000557644 OR51F1A6NGY5 319 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ELK3P41970 407 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 GPR1P46091 355 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CSNK1EP49674 416 aaKnown RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 XIAPP98170 497 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CAV1Q03135 178 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PEX6Q13608 980 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CHRNA6Q15825 494 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 SKIDA1Q1XH10 827 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 DNAJC21Q5F1R6 531 aaKnown RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF765Q7L2R6 523 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 SYT12Q8IV01 421 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 RAVER1Q8IY67 606 aaKnown RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 OR13H1Q8NG92 308 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 STAMBPL1Q96FJ0 436 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CDKN2AIPNLQ96HQ2 116 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 FCRL3Q96P31 734 aaPredicted RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PLEKHG4BQ96PX9 1271 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 LGR4Q9BXB1 951 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 SMOC1Q9H4F8 434 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ANKZF1Q9H8Y5 726 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 IL1RAPL1Q9NZN1 696 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms