RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	AZIN2	Q96A70	460 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	NEIL1	Q96FI4	390 aa	Predicted RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	BMF	Q96LC9	184 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	SPAG5	Q96R06	1193 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	GFM1	Q96RP9	751 aa	Known RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	CMKLR1	Q99788	373 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	ZFYVE21	Q9BQ24	234 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	CCDC3	Q9BQI4	270 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	LLPH	Q9BRT6	129 aa	Known RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	PRDM8	Q9NQV8	689 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	OLFML3	Q9NRN5	406 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	DNAJC28	Q9NX36	388 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	DKK3	Q9UBP4	350 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	RASAL2	Q9UJF2	1139 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	ING1	Q9UK53	422 aa	Predicted RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	INTS6	Q9UL03	887 aa	Known RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	PADI4	Q9UM07	663 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	HBS1L	Q9Y450	684 aa	Known RBP	4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076	UNC13C	Q8NB66	2214 aa		4.82	□□□□□ -1.64
SCFD1-223	ENST00000557076		A0A1W2PQU0	124 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076		A1L4Q6	167 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ZNF839	A8K0R7	811 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ZNF891	A8MT65	544 aa	Predicted RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	NPIPB8	E9PQR5	432 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	STMND1	H3BQB6	276 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	MCF2L	O15068	1137 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TBL1X	O60907	577 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CLDN1	O95832	211 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	RNF224	P0DH78	156 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	DLAT	P10515	647 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CCDC130	P13994	396 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	HGF	P14210	728 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TRIM21	P19474	475 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	NNMT	P40261	264 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	RABIF	P47224	123 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	UQCRFS1	P47985	274 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	GLRB	P48167	497 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	NDST1	P52848	882 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	METAP1	P53582	386 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TAS2R38	P59533	333 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	RAC3	P60763	192 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CCL7	P80098	99 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SULT2A1	Q06520	285 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ABHD18	Q0P651	414 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CNTN1	Q12860	1018 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	FHL2	Q14192	279 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	PSMD6	Q15008	389 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	NRN1L	Q496H8	165 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	RILPL1	Q5EBL4	403 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ZMAT1	Q5H9K5	638 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	AGBL4	Q5VU57	503 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	PM20D1	Q6GTS8	502 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ESRP1	Q6NXG1	681 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	LVRN	Q6Q4G3	990 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CRTC1	Q6UUV9	634 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TIPARP	Q7Z3E1	657 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TAX1BP1	Q86VP1	789 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	HORMAD1	Q86X24	394 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	FAM114A1	Q8IWE2	563 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	UNC45B	Q8IWX7	931 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SLC35F3	Q8IY50	421 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SDR16C5	Q8N3Y7	309 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	OR6C4	Q8NGE1	309 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	WFDC5	Q8TCV5	224 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	DNAJC19	Q96DA6	116 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CYFIP2	Q96F07	1278 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	ZNF503	Q96F45	646 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SLC45A3	Q96JT2	553 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TBATA	Q96M53	351 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CALN1	Q9BXU9	219 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	DUSP16	Q9BY84	665 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SMYD3	Q9H7B4	428 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	CAAP1	Q9H8G2	361 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	EPB41L5	Q9HCM4	733 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	OLA1	Q9NTK5	396 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	FOXJ2	Q9P0K8	574 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SPAST	Q9UBP0	616 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	PISD	Q9UG56	409 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	SARDH	Q9UL12	918 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	MYH10	P35580	1976 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TCHH	Q07283	1943 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	POLE	Q07864	2286 aa		4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	TDRD6	O60522	2096 aa	Known RBP	4.81	□□□□□ -1.64
SCFD1-223	ENST00000557076	MED13L	Q71F56	2210 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	UBE4B	O95155	1302 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076		A0A1W2PQM1	296 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	POM121B	A6NF01	834 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076		A6NNZ2	444 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076		D6RAR5	112 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	CASC3	O15234	703 aa	Known RBP	4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	ALOX15B	O15296	676 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	YY2	O15391	372 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	DLX3	O60479	287 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	GCAT	O75600	419 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	GCNT3	O95395	438 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	MOCS3	O95396	460 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	LTF	P02788	710 aa		4.8	□□□□□ -1.64
SCFD1-223	ENST00000557076	RPN1	P04843	607 aa	Known RBP	4.8	□□□□□ -1.64

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