RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DOLKQ9UPQ8 538 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MRPS7Q9Y2R9 242 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 STARD13Q9Y3M8 1113 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ASB3Q9Y575 518 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PCDHGA8Q9Y5G5 932 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SCN5AQ14524 2016 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 MAGEA13PA6NCF6 341 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 HACD1B0YJ81 288 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 H0Y626 953 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 PSMD9O00233 223 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SHOXO15266 292 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 RFPL1O75677 317 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 IGLV3-25P01717 112 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 LTFP02788 710 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ERCC2P18074 760 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CAPN3P20807 821 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 MAPK3P27361 379 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 RNF4P78317 190 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CYP4F2P78329 520 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CYP4F3Q08477 520 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 DCTN2Q13561 401 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CES4AQ5XG92 561 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 STEAP4Q687X5 459 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 OTOAQ7RTW8 1153 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 RTN4RL1Q86UN2 441 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SLC26A11Q86WA9 606 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 LRRC6Q86X45 466 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ARID3BQ8IVW6 561 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 COLGALT1Q8NBJ5 622 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 LINC01599Q8WXQ3 324 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ADAM2Q99965 735 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 BCL7BQ9BQE9 202 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ACBD6Q9BR61 282 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 COLEC11Q9BWP8 271 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 PITPNM3Q9BZ71 974 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF69Q9UC07 566 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 VPS51Q9UID3 782 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 FBXW11Q9UKB1 542 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ARL2BPQ9Y2Y0 163 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SNX10Q9Y5X0 201 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CHD5Q8TDI0 1954 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 B8ZZF3 427 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 KCNK1O00180 336 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 EEF2KO00418 725 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TM9SF1O15321 606 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 INPPL1O15357 1258 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CRTAPO75718 401 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ALDH1A2O94788 518 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SUN1O94901 812 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ATP2A2P16615 1042 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CCNA2P20248 432 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 XPAP23025 273 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SP100P23497 879 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 PSMB4P28070 264 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CXCR3P49682 368 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ACADVLP49748 655 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ARFIP1P53367 373 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 AIF1P55008 147 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 RHAGQ02094 409 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CDK18Q07002 472 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ITKQ08881 620 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 GALNT1Q10472 559 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 RNF43Q68DV7 783 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 MACC1Q6ZN28 852 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TMPRSS9Q7Z410 1059 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TAC4Q86UU9 113 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TREML1Q86YW5 311 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 P3H2Q8IVL5 708 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 C10orf82Q8WW14 230 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 APOPT1Q96IL0 206 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 DHRS9Q9BPW9 319 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 WACQ9BTA9 647 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 EFHD1Q9BUP0 239 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 MFRPQ9BY79 579 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 DENND2DQ9H6A0 471 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 KANSL3Q9P2N6 904 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 PCOLCE2Q9UKZ9 415 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 POLHQ9Y253 713 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 SERTM1A2A2V5 107 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CHURC1-FNTBB4DL54 471 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ATP6V1G2-DDX39BF2Z307 99 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CCNDBP1O95273 360 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ZBTB11O95625 1053 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TOP3BO95985 862 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 GSTA1P08263 222 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 INHBAP08476 426 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ODC1P11926 461 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TCEA1P23193 301 aaKnown RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 HLA-FP30511 346 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ADSLP30566 484 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CD68P34810 354 aaPredicted RBP5.1□□□□□ -1.59
TMEM260-210ENST00000556422 CAPZA2P47755 286 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 ARHGDIAP52565 204 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 NCALDP61601 193 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 PRAMEP78395 509 aa5.1□□□□□ -1.59
TMEM260-210ENST00000556422 TUSC3Q13454 348 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms