RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 POLR1BQ9H9Y6 1135 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 UBE2TQ9NPD8 197 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ACP6Q9NPH0 428 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ZFR2Q9UPR6 939 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CSNK1G3Q9Y6M4 447 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 TENM4Q6N022 2769 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 A0A1W2PNU3 283 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 NEMP2A6NFY4 417 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 I6L893 689 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 K7ERQ8 282 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 K7ESM1 405 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 PSMA7O14818 248 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SMAD6O43541 496 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 USP12O75317 370 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 GNA14O95837 355 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 HNRNPA2B1P22626 353 aaKnown RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 AKT2P31751 481 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 PPP1R2P41236 205 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 DUSP3P51452 185 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 UCNP55089 124 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 CXADRP78310 365 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC20A2Q08357 652 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 PDCLQ13371 301 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 POM121L1PQ3SYA9 428 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 YOD1Q5VVQ6 348 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 Q6ZSR6 202 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SPATC1Q76KD6 591 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF397Q8NF99 534 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 KLK6Q92876 244 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 ARRDC3Q96B67 414 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 PRR11Q96HE9 360 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 RPRD1AQ96P16 312 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 LENG8Q96PV6 779 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 DEPDC7Q96QD5 511 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC17A9Q9BYT1 436 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 ANLNQ9NQW6 1124 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 DDIT4Q9NX09 232 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 ARHGEF38Q9NXL2 777 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC25A13Q9UJS0 675 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 VPS28Q9UK41 221 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 MAN1B1Q9UKM7 699 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 VANGL2Q9ULK5 521 aa9.11□□□□□ -0.95
GTF2A1-204ENST00000556268 IGLV3-10A0A075B6K4 115 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 TRAV20A0A0B4J274 112 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 SPTY2D1-AS1A0A0U1RR47 76 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 A0A1B0GTL3 188 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 BECN2A8MW95 431 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 J3QKU1 62 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 TPP1O14773 563 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 PDPK1O15530 556 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 SNAP91O60641 907 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 HSF2BPO75031 334 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CSO75390 466 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ZMPSTE24O75844 475 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CNTN5O94779 1100 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CSF2P04141 144 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 MYF5P13349 255 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 PRLRP16471 622 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CXCR3P49682 368 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 NUMBP49757 651 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 TMPRSS3P57727 454 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CLDN2P57739 230 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 HNRNPKP61978 463 aaKnown RBP eCLIP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 KRT83P78385 493 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 STIM1Q13586 685 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 FGL2Q14314 439 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 FZD2Q14332 565 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ISXQ2M1V0 245 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CCDC40Q4G0X9 1142 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ALFQ53S48 1182 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 HS1BP3Q53T59 392 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 SEL1L3Q68CR1 1132 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 GCNT7Q6ZNI0 430 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 C11orf57Q6ZUT1 292 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ERN2Q76MJ5 926 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 SETD3Q86TU7 594 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 CHST14Q8NCH0 376 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ASB12Q8WXK4 309 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 VOPP1Q96AW1 172 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 PGAP3Q96FM1 320 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 FEM1CQ96JP0 617 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 PPP1R13BQ96KQ4 1090 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 FAM81BQ96LP2 452 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 NPY6RQ99463 290 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 LGMNQ99538 433 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 KLF6Q99612 283 aaPredicted RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 LUC7LQ9NQ29 371 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF212Q9UDV6 495 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 FADS3Q9Y5Q0 445 aa9.1□□□□□ -0.95
GTF2A1-204ENST00000556268 A0A0D9SEW6 157 aa9.09□□□□□ -0.95
GTF2A1-204ENST00000556268 CXorf51AA0A1B0GTR3 108 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms