RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CASP8Q14790 479 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 GPR33Q49SQ1 333 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CES3Q6UWW8 571 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 KIAA0408Q6ZU52 694 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CYS1Q717R9 158 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 TSPAN33Q86UF1 283 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 LRRC6Q86X45 466 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 PHYKPLQ8IUZ5 450 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CBARPQ8N350 705 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-220ENST00000555634 RIBC1Q8N443 379 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-220ENST00000555634 TTC30BQ8N4P2 665 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 OR13C4Q8NGS5 318 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 HDAC10Q969S8 669 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 AP2M1Q96CW1 435 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 DTD2Q96FN9 168 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 NSMCE3Q96MG7 304 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CPNE1Q99829 537 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 TSSK1BQ9BXA7 367 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 SPATA16Q9BXB7 569 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 TXLNGYQ9BZA5 131 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 PCED1AQ9H1Q7 454 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 SLC6A17Q9H1V8 727 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 FAM83DQ9H4H8 585 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 VIPAS39Q9H9C1 493 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 BPIFA1Q9NP55 256 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 IL17CQ9P0M4 197 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 FETUBQ9UGM5 382 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 EBF1Q9UH73 591 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 SLC24A2Q9UI40 661 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CYP8B1Q9UNU6 501 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 PLAAQ9Y263 795 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 NCOR1O75376 2440 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 PLK4O00444 970 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 AXIN1O15169 862 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 CD3EAPO15446 510 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 MAP3K13O43283 966 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 BUD23O43709 281 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 MMP20O60882 483 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 CDH16O75309 829 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 NDUFS3O75489 264 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 KRT38O76015 456 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 SRP72O76094 671 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 GOT2P00505 430 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 C1SP09871 688 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 C7P10643 843 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 AKT1P31749 480 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 MSH2P43246 934 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 SERPINB9P50453 376 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 METAP1P53582 386 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 GTF2H3Q13889 308 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 HSP90AA5PQ58FG0 334 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 RAET1GQ6H3X3 334 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 NEPROQ6NW34 567 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 ESRP1Q6NXG1 681 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 MARK2Q7KZI7 788 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 TAS2R42Q7RTR8 314 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 SNX20Q7Z614 316 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 TRIM69Q86WT6 500 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 HORMAD1Q86X24 394 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 FBXL6Q8N531 539 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 TRAM1L1Q8N609 369 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 PPM1NQ8N819 430 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 DENND6BQ8NEG7 585 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 OR13J1Q8NGT2 312 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 UHMK1Q8TAS1 419 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 HEXDCQ8WVB3 486 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 ANKRD7Q92527 254 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 SGSM3Q96HU1 749 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 TCF12Q99081 682 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 TPSD1Q9BZJ3 242 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 ITM2CQ9NQX7 267 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 IARS2Q9NSE4 1012 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 INTS10Q9NVR2 710 aaKnown RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 PSMC3IPQ9P2W1 217 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 SERGEFQ9UGK8 458 aa11.16□□□□□ -0.62
SHMT2-220ENST00000555634 CORO1CQ9ULV4 474 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-220ENST00000555634 CCDC163A0A0D9SF12 145 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 IQANK1A0A1B0GTG1 560 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ZCWPW2A0A1B0GU75 182 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 A0A1W2PQU0 124 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 CCDC162PA2VCL2 907 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ANTXRLA6NF34 631 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 MEI4A8MW99 385 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 POC1B-GALNT4F8VUJ3 575 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 QSOX1O00391 747 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 RASGRF2O14827 1237 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms