RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ZSCAN5DPP0CG00 497 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 CDK4P11802 303 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 ETS1P14921 441 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 LIG3P49916 1009 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 THOP1P52888 689 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 HNRNPKP61978 463 aaKnown RBP eCLIP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 POLR2LP62875 67 aaKnown RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 CAV1Q03135 178 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 TRAF2Q12933 501 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 ILKQ13418 452 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 LRRC14Q15048 493 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 PARP6Q2NL67 630 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 WSCD2Q2TBF2 565 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 CCNI2Q6ZMN8 369 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 TMPRSS7Q7RTY8 843 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 ZNF548Q8NEK5 533 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 TBATAQ96M53 351 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 CEP41Q9BYV8 373 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 FAM129AQ9BZQ8 928 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 POLR1EQ9GZS1 481 aaKnown RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 DPH5Q9H2P9 285 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 CAAP1Q9H8G2 361 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 NOD2Q9HC29 1040 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 NT5MQ9NPB1 228 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 MBNL1Q9NR56 388 aaKnown RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 RAB6BQ9NRW1 208 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 NLGN3Q9NZ94 848 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 WHRNQ9P202 907 aa9.64□□□□□ -0.87
ACTN1-215ENST00000555616 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
ACTN1-215ENST00000555616 TTC24A2A3L6 582 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 H3BM21 787 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 DNALI1O14645 258 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SCAMP1O15126 338 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SIGLEC6O43699 453 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ANXA9O76027 345 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SEC31AO94979 1220 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PGLSO95336 258 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 CPP00450 1065 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ELFN1P0C7U0 828 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 CKMT2P17540 419 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 NFKB1P19838 968 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 CES1P23141 567 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ACP1P24666 158 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 TNNT3P45378 269 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 RPL21P46778 160 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 LMAN1P49257 510 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 MAXP61244 160 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 BASP1P80723 227 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ITKQ08881 620 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 EIF2B5Q13144 721 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 DNAJC3Q13217 504 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 MTM1Q13496 603 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PTK2BQ14289 1009 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 HLTFQ14527 1009 aaKnown RBP eCLIP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ZNF542PQ5EBM4 170 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 IZUMO3Q5VZ72 239 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PRUNE1Q86TP1 453 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 HOOK3Q86VS8 718 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PPIL6Q8IXY8 311 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 GALNT15Q8N3T1 639 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 CNTD1Q8N815 330 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 IFT81Q8WYA0 676 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SEC14L1Q92503 715 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SLC25A51Q9H1U9 297 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ANKZF1Q9H8Y5 726 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 GLOD4Q9HC38 313 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ARGLU1Q9NWB6 273 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 B4GALT6Q9UBX8 382 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 APOBEC3BQ9UH17 382 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 KLF15Q9UIH9 416 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 ANAPC5Q9UJX4 755 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PNMA8BQ9ULN7 279 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SHOC2Q9UQ13 582 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 COQ6Q9Y2Z9 468 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 AAR2Q9Y312 384 aaKnown RBP9.63□□□□□ -0.87
ACTN1-215ENST00000555616 SNX24Q9Y343 169 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PCDHGC4Q9Y5F7 938 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 CSNK1G3Q9Y6M4 447 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
ACTN1-215ENST00000555616 TRPM6Q9BX84 2022 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 ESYT3A0FGR9 886 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 NEMP2A6NFY4 417 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 ERI2A8K979 691 aaKnown RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 FFAR2O15552 330 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 PSMD3O43242 534 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 AQP9O43315 295 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 FZD6O60353 706 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 RECQL5O94762 991 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 APRTP07741 180 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 ALPPL2P10696 532 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms