RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CRELD2Q6UXH1 353 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 TSPAN33Q86UF1 283 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 ZC3HC1Q86WB0 502 aaKnown RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 HJURPQ8NCD3 748 aaPredicted RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 FAM234AQ9H0X4 552 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 PDE7BQ9NP56 450 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 COPG2Q9UBF2 871 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 SEC63Q9UGP8 760 aaKnown RBP5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 SQORQ9Y6N5 450 aa5.47□□□□□ -1.53
CKS1BP1-201ENST00000555221 KANSL1LA0AUZ9 987 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 P4HA2O15460 535 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 HSPA12AO43301 675 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZIC3O60481 467 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ENTPD3O75355 529 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ERAL1O75616 437 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ACADLP28330 430 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 STX2P32856 288 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 EIF2S3P41091 472 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 NRIP1P48552 1158 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 COMPP49747 757 aaPredicted RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 RRP1P56182 461 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 PNLIPRP3Q17RR3 467 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 RARS2Q5T160 578 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 LRIF1Q5T3J3 769 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 TYW3Q6IPR3 259 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 B3GNT6Q6ZMB0 384 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 TAOK1Q7L7X3 1001 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 TICAM2Q86XR7 235 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 MCEMP1Q8IX19 187 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 OR8K5Q8NH50 307 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 TRPC4APQ8TEL6 797 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 NUDCD1Q96RS6 583 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 SRSF8Q9BRL6 282 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 HAUS8Q9BT25 410 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 C1QTNF7Q9BXJ2 289 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 DCLK3Q9C098 648 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 HRH4Q9H3N8 390 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 WDR26Q9H7D7 661 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 CNGB3Q9NQW8 809 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 EXO1Q9UQ84 846 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF521Q96K83 1311 aa5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 ATXN2Q99700 1313 aaKnown RBP5.46□□□□□ -1.54
CKS1BP1-201ENST00000555221 LRRC72A6NJI9 287 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 J3KR12 359 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ATP2A1O14983 1001 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 CH25HO95992 272 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 G6PDP11413 515 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ANXA7P20073 488 aaKnown RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 C21orf33P30042 268 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 AMTP48728 403 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 MXI1P50539 228 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF81P51508 661 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 PGGT1BP53609 377 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 CSNK2A1P68400 391 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 PCLAFQ15004 111 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 C15orf59Q2T9L4 293 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 EIF2S3LQ2VIR3 472 aaKnown RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 NAA16Q6N069 864 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 KCTD18Q6PI47 426 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ADGRA1Q86SQ6 560 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ARID3BQ8IVW6 561 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 CSNK2A3Q8NEV1 391 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 NSMCE1Q8WV22 266 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 PRPF31Q8WWY3 499 aaKnown RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 TXNDC15Q96J42 360 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 KXD1Q9BQD3 176 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 SF3B5Q9BWJ5 86 aaKnown RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 SIL1Q9H173 461 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 OSGEPL1Q9H4B0 414 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 MAGIXQ9H6Y5 334 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 C17orf75Q9HAS0 396 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 ACSS1Q9NUB1 689 aaPredicted RBP5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 OR14J1Q9UGF5 321 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 PTGDR2Q9Y5Y4 395 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 CLIC4Q9Y696 253 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 RPS6KL1Q9Y6S9 549 aa5.45□□□□□ -1.54
CKS1BP1-201ENST00000555221 LOC100509620A0A075B734 347 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 A0A1B0GVT2 93 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 OR2A25A4D2G3 310 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 GLOD5A6NK44 160 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 A8MV72 311 aaPredicted RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 INAFM1C9JVW0 142 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 H3BQ06 376 aaPredicted RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 SH2B2O14492 632 aaPredicted RBP5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 CSPG5O95196 566 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 CDK4P11802 303 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 SELLP14151 372 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 IL11P20809 199 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 RRM1P23921 792 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 GPR143P51810 404 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 DSC1Q08554 894 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 KCNC3Q14003 757 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 EFNB3Q15768 340 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 LEXMQ3ZCV2 418 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF805Q5CZA5 627 aa5.44□□□□□ -1.54
CKS1BP1-201ENST00000555221 EFHC1Q5JVL4 640 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms