RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DCLRE1BQ9H816 532 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 AP3M1Q9Y2T2 418 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ATRXP46100 2492 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GPR89AB7ZAQ6 455 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 GPR89BP0CG08 455 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 KLRK1P26718 216 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CDKL4Q5MAI5 379 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 C9orf64Q5T6V5 341 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 NPNTQ6UXI9 565 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TMC3Q7Z5M5 1100 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SLC22A8Q8TCC7 542 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 TATDN2Q93075 761 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SIPA1Q96FS4 1042 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 CCDC120Q96HB5 630 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 AARSD1Q9BTE6 412 aaKnown RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 RXFP1Q9HBX9 757 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PHPT1Q9NRX4 125 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-216ENST00000555002 PROCP04070 461 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RYKP34925 604 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 GPD2P43304 727 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 IST1P53990 364 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FAPQ12884 760 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RAB39AQ14964 217 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 BMT2Q1RMZ1 405 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ZFP1Q6P2D0 407 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SLC30A10Q6XR72 485 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TMPRSS11BQ86T26 416 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 AMER2Q8N7J2 671 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF548Q8NEK5 533 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SLC6A15Q9H2J7 730 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TPK1Q9H3S4 243 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 C17orf75Q9HAS0 396 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM150BA6NC51 233 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FPGTO14772 594 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 GLUD1P00367 558 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 VIPP01282 170 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 UROSP10746 265 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RGS19P49795 217 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 C1QBPQ07021 282 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 AGBL3Q8NEM8 1001 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PTPN18Q99952 460 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FBXW2Q9UKT8 454 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NR2E1Q9Y466 385 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NPC1L1Q9UHC9 1359 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CEP152O94986 1710 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 C15orf38-AP3S2A0A0A6YYH1 394 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TPST2O60704 377 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SMIM10L2AP0DMW4 78 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SMIM10L2BP0DMW5 78 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SDC2P34741 201 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 AP2S1P53680 142 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ENPEPQ07075 957 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ARHGAP22Q7Z5H3 698 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ARPINQ7Z6K5 226 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CEP97Q8IW35 865 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SLC34A3Q8N130 599 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 BOLLQ8N9W6 283 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MGME1Q9BQP7 344 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FKBP6O75344 327 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 KDM4BO94953 1096 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NRG1Q02297 640 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NBPF12Q5TAG4 269 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 KDM7AQ6ZMT4 941 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SRFBP1Q8NEF9 429 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MYCBPAPQ8TBZ2 947 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 KLK6Q92876 244 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CD101Q93033 1021 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PPP3R2Q96LZ3 170 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MBOAT7Q96N66 472 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PANX1Q96RD7 426 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CHIAQ9BZP6 476 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 EXD2Q9NVH0 621 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RRN3Q9NYV6 651 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RFX7Q2KHR2 1363 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FGF10O15520 208 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 INMTO95050 263 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 STBD1O95210 358 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CXCL14O95715 111 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ECHS1P30084 290 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 UBAP2Q5T6F2 1119 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CHSY3Q70JA7 882 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 LINGO2Q7L985 606 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 COMTD1Q86VU5 262 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SYNPOQ8N3V7 929 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MYO19Q96H55 970 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SEMA3CQ99985 751 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms