RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 EMCNQ9ULC0 261 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 TTC34A8MYJ7 566 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 KDELR3O43731 214 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ASLP04424 464 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.37
SHOX-204ENST00000554971 SRCP12931 536 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ETFBP38117 255 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 SLC1A6P48664 564 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 SULT2A1Q06520 285 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 HSF5Q4G112 596 aaPredicted RBP17.39■□□□□ 0.37
SHOX-204ENST00000554971 TEDDM1Q5T9Z0 273 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 FRS2Q8WU20 508 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 UCMAQ8WVF2 138 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ERLEC1Q96DZ1 483 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 TEKT5Q96M29 485 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 GABRG3Q99928 467 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 DNAJC28Q9NX36 388 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 PLA2G4CQ9UP65 541 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 STON1Q9Y6Q2 735 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ANKRD36A6QL64 1941 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 PRR33A8MZF0 331 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 MAFKO60675 156 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 PEX11BO96011 259 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 APOA4P06727 396 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ALOX15P16050 662 aaPredicted RBP17.39■□□□□ 0.37
SHOX-204ENST00000554971 NTSR1P30989 418 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 POLD2P49005 469 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 PRKAA2P54646 552 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 CRADDP78560 199 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ANKRD20A4Q4UJ75 823 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 KIAA1211LQ6NV74 962 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 OR52K1Q8NGK4 314 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 N4BP2L2Q92802 583 aaPredicted RBP17.39■□□□□ 0.37
SHOX-204ENST00000554971 CCDC106Q9BWC9 280 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 COPG2Q9UBF2 871 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 MMP17Q9ULZ9 603 aa17.39■□□□□ 0.37
SHOX-204ENST00000554971 ZCWPW2A0A1B0GU75 182 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 ARHGAP42A6NI28 874 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 KCNK1O00180 336 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 PRAMEF11O60813 436 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 SRPRAP08240 638 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 GM2AP17900 193 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 COL9A1P20849 921 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 AVPR2P30518 371 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 SERPINH1P50454 418 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 FNDC3BQ53EP0 1204 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 CES4AQ5XG92 561 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 SERPINA13PQ6UXR4 307 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 LRRC49Q8IUZ0 686 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 SPEM1Q8N4L4 309 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 DNAAF3Q8N9W5 541 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 OR6Y1Q8NGX8 325 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 RILPQ96NA2 401 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 SOX13Q9UN79 622 aa17.38■□□□□ 0.37
SHOX-204ENST00000554971 APOBEC2Q9Y235 224 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 AAR2Q9Y312 384 aaKnown RBP17.38■□□□□ 0.37
SHOX-204ENST00000554971 B2RBV5 119 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ZBTB24O43167 697 aaPredicted RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 CCNCP24863 283 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 PGM1P36871 562 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 HK2P52789 917 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 SATB1Q01826 763 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 CDH17Q12864 832 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 PCLAFQ15004 111 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 RINLQ6ZS11 566 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 SYT13Q7L8C5 426 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ALYREFQ86V81 257 aaKnown RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 ZNF354CQ86Y25 554 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 UNC5BQ8IZJ1 945 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 KDM1BQ8NB78 822 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 GORASP1Q9BQQ3 440 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 NKX1-2Q9UD57 310 aaPredicted RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 ANKRD6Q9Y2G4 727 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 PSAT1Q9Y617 370 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 BPTFQ12830 3046 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 TMEM114B3SHH9 223 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 NPC1O15118 1278 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ATP9BO43861 1147 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ERVK-10P10266 1014 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 CPA3P15088 417 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 DLG2Q15700 870 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 CRY1Q16526 586 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 HNRNPA1L2Q32P51 320 aaKnown RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 TMEM31Q5JXX7 168 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 C6orf163Q5TEZ5 329 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 RETSATQ6NUM9 610 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 MAMSTRQ6ZN01 415 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 MAML2Q8IZL2 1156 aaPredicted RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 RDH11Q8TC12 318 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 STON2Q8WXE9 905 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 VOPP1Q96AW1 172 aa17.37■□□□□ 0.37
SHOX-204ENST00000554971 ZNF669Q96BR6 464 aaPredicted RBP17.37■□□□□ 0.37
SHOX-204ENST00000554971 FCRL3Q96P31 734 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms