RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ALG9Q9H6U8 611 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 HCFC1R1Q9NWW0 138 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 CXXC1Q9P0U4 656 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 DPP7Q9UHL4 492 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 LIMK2P53671 638 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 MPPE1Q53F39 396 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 SIRPB2Q5JXA9 342 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 TLR9Q9NR96 1032 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CD274Q9NZQ7 290 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 XPR1Q9UBH6 696 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 KPNA3O00505 521 aaPredicted RBP16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CBFA2T3O75081 653 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 SERPINE1P05121 402 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 TSPAN8P19075 237 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 SLC6A4P31645 630 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 HADHAP40939 763 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 TEAD2Q15562 447 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 TSTD2Q5T7W7 516 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CAMK1DQ8IU85 385 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 BBS7Q8IWZ6 715 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 E9PBE3 544 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CD3EAPO15446 510 aaKnown RBP16.55■□□□□ 0.24
PCNX1-209ENST00000554879 KLHL41O60662 606 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CASP2P42575 452 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 SLC1A2P43004 574 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 PPP3CCP48454 512 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 RAB10P61026 200 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 NTHL1P78549 312 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 IRF9Q00978 393 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 SEMA3BQ13214 749 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 PTPRNQ16849 979 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CNSTQ6PJW8 725 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 HPS1Q92902 700 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 DCUN1D1Q96GG9 259 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CADM1Q9BY67 442 aaKnown RBP16.55■□□□□ 0.24
PCNX1-209ENST00000554879 CLPBQ9H078 707 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 ARL8BQ9NVJ2 186 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 WARS2Q9UGM6 360 aaKnown RBP16.55■□□□□ 0.24
PCNX1-209ENST00000554879 PACSIN3Q9UKS6 424 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 COQ6Q9Y2Z9 468 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 KNL1Q8NG31 2342 aa16.55■□□□□ 0.24
PCNX1-209ENST00000554879 BHMG1C9JSJ3 638 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 FOXD2O60548 495 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 VPS26AO75436 327 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 GM2AP17900 193 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 POLR2EP19388 210 aaKnown RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SERPINA4P29622 427 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 PERM1Q5SV97 790 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 STXBP5Q5T5C0 1151 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 RIPOR1Q6ZS17 1223 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 CDHR3Q6ZTQ4 885 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SH3GL1Q99961 368 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 CWH43Q9H720 699 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 THAP1Q9NVV9 213 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 COMMD8Q9NX08 183 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 GKP32189 559 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 NIPAL4Q0D2K0 466 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 KIF19Q2TAC6 998 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 CCDC153Q494R4 210 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 FOXB2Q5VYV0 432 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 OR4L1Q8NH43 312 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 RFWD2Q8NHY2 731 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SLC28A3Q9HAS3 691 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 GSC2O15499 205 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 HNRNPCL1O60812 293 aaKnown RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 APOA4P06727 396 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 LPOP22079 712 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
PCNX1-209ENST00000554879 FAAH2Q6GMR7 532 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 FAM151BQ6UXP7 276 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 PRR23CQ6ZRP0 262 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 MRGPRX2Q96LB1 330 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 RNF112Q9ULX5 631 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 ILVBLA1L0T0 632 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 GRXCR1A8MXD5 290 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 TK2O00142 265 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 MAN1A2O60476 641 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 PRAMEF11O60813 436 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 GJB3O75712 270 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 UGT2B4P06133 528 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 ITGALP20701 1170 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 CRABP2P29373 138 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 STX1BP61266 288 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SCML4Q8N228 414 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 ACMSDQ8TDX5 336 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 NXNL1Q96CM4 212 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SLC39A13Q96H72 371 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 IL12RB2Q99665 862 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 FETUBQ9UGM5 382 aa16.54■□□□□ 0.24
PCNX1-209ENST00000554879 SDK1Q7Z5N4 2213 aa16.53■□□□□ 0.24
PCNX1-209ENST00000554879 CXCL10P02778 98 aa16.53■□□□□ 0.24
PCNX1-209ENST00000554879 CAPN1P07384 714 aa16.53■□□□□ 0.24
PCNX1-209ENST00000554879 BPGMP07738 259 aa16.53■□□□□ 0.24
PCNX1-209ENST00000554879 GRK2P25098 689 aa16.53■□□□□ 0.24
PCNX1-209ENST00000554879 MAP4P27816 1152 aaKnown RBP16.53■□□□□ 0.24
PCNX1-209ENST00000554879 CRHR1P34998 444 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms