RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 WDR6Q9NNW5 1121 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 DIAPH3Q9NSV4 1193 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 DECR2Q9NUI1 292 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 BLOC1S4Q9NUP1 217 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 MAP3K20Q9NYL2 800 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 HACL1Q9UJ83 578 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 PCDHA12Q9UN75 941 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 A4GNTQ9UNA3 340 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 HS3ST3B1Q9Y662 390 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 SQORQ9Y6N5 450 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 COL4A5P29400 1685 aa1.59□□□□□ -2.16
PRPF39-208ENST00000554785 SMG6Q86US8 1419 aaKnown RBP1.59□□□□□ -2.16
PRPF39-208ENST00000554785 NSD3Q9BZ95 1437 aa1.59□□□□□ -2.16
PRPF39-208ENST00000554785 USP42Q9H9J4 1324 aaKnown RBP1.59□□□□□ -2.16
PRPF39-208ENST00000554785 A0A1W2PP64 1363 aa1.59□□□□□ -2.16
PRPF39-208ENST00000554785 KIF20BQ96Q89 1820 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TYW5A2RUC4 315 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EME2A4GXA9 379 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PI4KAP2A4QPH2 592 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FAM90A10PA6NDY2 464 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 GAGE12JA6NER3 117 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PGPEP1LA6NFU8 196 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NPIPB15A6NHN6 443 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CBY3A6NI87 242 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TTC36A6NLP5 189 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 LRRC53A6NM62 1247 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 B4DGG1 531 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EBAG9O00559 213 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MDM4O15151 490 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TGFB1I1O43294 461 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SEC14L2O76054 403 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NDUFB8O95169 186 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 IFNA2P01563 188 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KLKB1P03952 638 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 HEXAP06865 529 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MMP3P08254 477 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SPARCP09486 303 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF8P17098 575 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CTPS1P17812 591 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 AVPR1AP37288 418 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RGS2P41220 211 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ALDH7A1P49419 539 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 GNAQP50148 359 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 HUNKP57058 714 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RPL7AP62424 266 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SETQ01105 290 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FOXD4Q12950 439 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RUNX2Q13950 521 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PPP2R5BQ15173 497 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 HIST2H2ACQ16777 129 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PLEKHO1Q53GL0 409 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MANEAQ5SRI9 462 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ASPHD1Q5U4P2 390 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 HEPHL1Q6MZM0 1159 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CES5AQ6NT32 575 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MZT2BQ6NZ67 158 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CDC73Q6P1J9 531 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM71Q6P5X7 295 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF549Q6P9A3 640 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CPLX2Q6PUV4 134 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NEK10Q6ZWH5 1172 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SLC46A3Q7Z3Q1 461 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PCGF5Q86SE9 256 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TBC1D26Q86UD7 250 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 LURAP1LQ8IV03 231 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KIAA2013Q8IYS2 634 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MMP21Q8N119 569 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NGEFQ8N5V2 710 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ARFGAP1Q8N6T3 406 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RBMXL3Q8N7X1 1067 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SMRP1Q8NCR6 262 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MCPH1Q8NEM0 835 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CADM4Q8NFZ8 388 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CEP76Q8TAP6 659 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ASB5Q8WWX0 329 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RNF183Q96D59 192 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PIP5K1AQ99755 562 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CHCHD6Q9BRQ6 235 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 H2AFJQ9BTM1 129 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FAM234AQ9H0X4 552 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PRKRIP1Q9H875 184 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MAP6D1Q9H9H5 199 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BRF2Q9HAW0 419 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FZD3Q9NPG1 666 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KRT84Q9NSB2 600 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TBC1D22BQ9NU19 505 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SPATS2LQ9NUQ6 558 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CTNNAL1Q9UBT7 734 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CARD8Q9Y2G2 431 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FAM96BQ9Y3D0 163 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 LAS1LQ9Y4W2 734 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PSAT1Q9Y617 370 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PIAS3Q9Y6X2 628 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KDM6AO15550 1401 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BCORQ6W2J9 1755 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SCN7AQ01118 1682 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM272A0A1B0GTI8 110 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KLRF2D3W0D1 207 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 H0YIN7 160 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SMAD6O43541 496 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms