RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PKP2Q99959 881 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HERC2P3Q9BVR0 1158 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SARGQ9BW04 601 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 UNKQ9C0B0 810 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 C12orf65Q9H3J6 166 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PIDD1Q9HB75 910 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MKLN1Q9UL63 735 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CNOT6Q9ULM6 557 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NDUFAF1Q9Y375 327 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 AUP1Q9Y679 476 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 C15orf38-AP3S2A0A0A6YYH1 394 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 A0A1W2PP18 115 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ARHGEF37A1IGU5 675 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HEATR9A2RTY3 570 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PRORSD1PA6NEY8 169 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM110-MUSTN1A8MSY1 372 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 OR7A17O14581 309 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GYG2O15488 501 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SNAP91O60641 907 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ALPLP05186 524 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ENO1P06733 434 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 RBP1P09455 135 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MPC1LP0DKB6 136 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 IMPDH2P12268 514 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NFKB1P19838 968 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 VARSP26640 1264 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CDC25CP30307 473 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CD97P48960 835 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MTM1Q13496 603 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TRPC3Q13507 836 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LPIN1Q14693 890 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TAF1AQ15573 450 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MS4A13Q5J8X5 152 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 C10orf62Q5T681 223 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NCEH1Q6PIU2 408 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CD300LDQ6UXZ3 194 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SCARA5Q6ZMJ2 495 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ARPINQ7Z6K5 226 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TP53INP2Q8IXH6 220 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 DCP1BQ8IZD4 617 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HS6ST3Q8IZP7 471 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NDUFAF2Q8N183 169 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MFSD4AQ8N468 514 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GIMAP7Q8NHV1 300 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TBC1D31Q96DN5 1066 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CASD1Q96PB1 797 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PSKH2Q96QS6 385 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TAPBPLQ9BX59 468 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KLF16Q9BXK1 252 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SLC29A3Q9BZD2 475 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SLC39A8Q9C0K1 460 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 DUSP21Q9H596 190 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 EPHX3Q9H6B9 360 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PNPLA3Q9NST1 481 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KLHL11Q9NVR0 708 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TAS2R13Q9NYV9 303 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 OARD1Q9Y530 152 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SCN2AQ99250 2005 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SH3PXD2BA1X283 911 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 FAM234BA2RU67 622 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ARL5CA6NH57 179 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MEIS3P2A8K0S8 358 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 B2RBV5 119 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PRMT3O60678 531 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SORBS2O94875 1100 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GABARAPO95166 117 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 FGF1P05230 155 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GJB1P08034 283 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LTA4HP09960 611 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 UBTFL6P0CB48 400 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HARSP12081 509 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 XRCC1P18887 633 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PEX2P28328 305 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 EPHA3P29320 983 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TGFBR2P37173 567 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GSTM5P46439 218 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PGFP49763 221 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GAS1P54826 345 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ALDH18A1P54886 795 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MLC1Q15049 377 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TRIP13Q15645 432 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SMTNL2Q2TAL5 461 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ARL13AQ5H913 290 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 RNF187Q5TA31 235 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ATG9BQ674R7 924 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HEATR6Q6AI08 1181 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CXorf57Q6NSI4 855 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SBSNQ6UWP8 590 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PDZD4Q76G19 769 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 VN1R5Q7Z5H4 357 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF548Q8NEK5 533 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TBC1D15Q8TC07 691 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CD200R1Q8TD46 325 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CALML6Q8TD86 181 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SLC2A14Q8TDB8 520 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SH3RF2Q8TEC5 729 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HDAC2Q92769 488 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KCNJ9Q92806 393 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ATP2A3Q93084 1043 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms