RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KIAA1958Q8N8K9 716 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SH3YL1Q96HL8 342 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HIST1H2AAQ96QV6 131 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM168Q9H0V1 697 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 THAP9Q9H5L6 903 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LIMD1Q9UGP4 676 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CYP8B1Q9UNU6 501 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NUP160Q12769 1436 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TRAV19A0A0A6YYK7 116 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DPPA5A6NC42 116 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KMOO15229 486 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PRKD3O94806 890 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ANXA6P08133 673 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CD1BP29016 333 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RPL9P32969 192 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARFIP1P53367 373 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 IST1P53990 364 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SPIBQ01892 262 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NCF4Q15080 339 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL35Q6PF15 583 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SMARCD3Q6STE5 483 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KDM7AQ6ZMT4 941 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 OR7G1Q8NGA0 311 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF473Q8WTR7 871 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GFM1Q96RP9 751 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C2orf49Q9BVC5 232 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TPK1Q9H3S4 243 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARL15Q9NXU5 204 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C1orf232A0A0U1RR37 186 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LSM1O15116 133 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PSTPIP1O43586 416 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 B4GALT2O60909 372 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ETV5P41161 510 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GALCP54803 685 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SIRPAP78324 504 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SNX20Q7Z614 316 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FOXN4Q96NZ1 517 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 UCK2Q9BZX2 261 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF350Q9GZX5 532 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 BATF3Q9NR55 127 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 R3HDM2Q9Y2K5 976 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 USP15Q9Y4E8 981 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NRCAMQ92823 1304 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HEG1Q9ULI3 1381 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 JAZF1Q86VZ6 243 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZSCAN1Q8NBB4 408 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SNF8Q96H20 258 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 AP1S3Q96PC3 154 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ERAP1Q9NZ08 941 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHGA8Q9Y5G5 932 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MAU2Q9Y6X3 613 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ARAFP10398 606 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA3P43357 314 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ABCE1P61221 599 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDHR1Q96JP9 859 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TAPBPLQ9BX59 468 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 POLR3BQ9NW08 1133 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DDX43Q9NXZ2 648 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 WDR35Q9P2L0 1181 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MUC4Q99102 2169 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NPY2RP49146 381 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HERVK_113P62684 666 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RBP5P82980 135 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDONQ4KMG0 1287 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDHR3Q6ZTQ4 885 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 VASH1Q7L8A9 365 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF619Q8N2I2 560 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PRR18Q8N4B5 295 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF579Q8NAF0 562 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ATAD1Q8NBU5 361 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PROX1Q92786 737 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SERTAD4Q9NUC0 356 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FCF1Q9Y324 198 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHB5Q9Y5E4 795 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SYNGAP1Q96PV0 1343 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SMIM31A0A1B0GVY4 71 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 WDR27A2RRH5 827 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ENSAO43768 121 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GLP2RO95838 553 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 JAK1P23458 1154 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC12A3P55017 1021 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NCOA4Q13772 614 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 STK32CQ86UX6 486 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HERC6Q8IVU3 1022 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 EZH1Q92800 747 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC6A17Q9H1V8 727 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 EPB41L4AQ9HCS5 686 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 STARD5Q9NSY2 213 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL33A6NCF5 533 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 OR2AG2A6NM03 316 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PIK3CDO00329 1044 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FPGTO14772 594 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PEX11AO75192 247 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FHP07954 510 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C8orf89P0DMQ9 161 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HDCP19113 662 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HSF2Q03933 536 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PPP1R8Q12972 351 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 BNIP1Q12981 228 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms