RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 KRT34O76011 436 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 S1PR4O95977 384 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 FGF1P05230 155 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 TSPAN8P19075 237 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CFAP157Q5JU67 520 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 GPR158Q5T848 1215 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 WDR75Q8IWA0 830 aaKnown RBP11.68□□□□□ -0.54
SHMT2-212ENST00000554467 KREMEN2Q8NCW0 462 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PHF21BQ96EK2 531 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 TNKS2Q9H2K2 1166 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 OXSMQ9NWU1 459 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CIDEBQ9UHD4 219 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PRR5-ARHGAP8B1AHC4 643 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 SUPT3HO75486 399 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CTSAP10619 480 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CDK4P11802 303 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 MYOGP15173 224 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CD1EP15812 388 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 HLA-DPA1P20036 260 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CSRP3P50461 194 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 ARHGAP8P85298 464 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PEX6Q13608 980 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 CCDC117Q8IWD4 279 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-212ENST00000554467 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-212ENST00000554467 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
SHMT2-212ENST00000554467 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 PANX3Q96QZ0 392 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 WWP1Q9H0M0 922 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
SHMT2-212ENST00000554467 E9PBE3 544 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 KLHL41O60662 606 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 GLP2RO95838 553 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 IL1BP01584 269 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ALPIP09923 528 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ARSAP15289 507 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 EN2P19622 333 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 NCF2P19878 526 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PMLP29590 882 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PPM1AP35813 382 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 LEPRP48357 1165 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 IDH3AP50213 366 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 RHOAP61586 193 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 GRM2Q14416 872 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SLC9B1Q4ZJI4 515 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 FBXO48Q5FWF7 155 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ARL13AQ5H913 290 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ZNF549Q6P9A3 640 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SETD3Q86TU7 594 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ITIH5Q86UX2 942 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 TMC8Q8IU68 726 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 TXNDC5Q8NBS9 432 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 BRSK1Q8TDC3 778 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ABTB1Q969K4 478 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ZNF599Q96NL3 588 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 RANBP9Q96S59 729 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 TDRD1Q9BXT4 1180 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SLC46A2Q9BY10 475 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 WDR55Q9H6Y2 383 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 IGSF5Q9NSI5 407 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 KLHL2O95198 593 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PIGNO95427 931 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 FGBP02675 491 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 JUNP05412 331 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PIM1P11309 404 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CR2P20023 1033 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 GRK2P25098 689 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CTNNB1P35222 781 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 GALK1P51570 392 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 NTHL1P78549 312 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 TBL3Q12788 808 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ZYG11AQ6WRX3 759 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CHST9Q7L1S5 443 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CAMK1DQ8IU85 385 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ARMC5Q96C12 935 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CCDC28BQ9BUN5 200 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 MFSD1Q9H3U5 465 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ALG9Q9H6U8 611 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 COG4Q9H9E3 785 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 DDX18Q9NVP1 670 aaKnown RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PACSIN3Q9UKS6 424 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 VWA7Q9Y334 891 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SLC7A4O43246 635 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SIN3BO75182 1162 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 ZMPSTE24O75844 475 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 PGM3O95394 542 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CD70P32970 193 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 CTSOP43234 321 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 KCNC1P48547 511 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 STK19P49842 368 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SULT2A1Q06520 285 aa11.67□□□□□ -0.54
SHMT2-212ENST00000554467 SFT2D3Q587I9 215 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms