RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TRIM29Q14134 588 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 KCNJ12Q14500 433 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF234Q14588 700 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ANKRD1Q15327 319 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TAF12Q16514 161 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ANO4Q32M45 955 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ATP13A4Q4VNC1 1196 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 VSTM1Q6UX27 236 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 KIAA1324Q6UXG2 1013 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 KDM7AQ6ZMT4 941 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 EPM2AIP1Q7L775 607 aaPredicted RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 C1QL2Q7Z5L3 287 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ACOT1Q86TX2 421 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 SPATS2Q86XZ4 545 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 FMNL3Q8IVF7 1028 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 NUP93Q8N1F7 819 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM86AQ8N2M4 240 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 GPD1LQ8N335 351 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 LNX2Q8N448 690 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 HDDC3Q8N4P3 179 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 B3GALNT2Q8NCR0 500 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 OR6B3Q8NGW1 331 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 CEP76Q8TAP6 659 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 SETD7Q8WTS6 366 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 FBXO32Q969P5 355 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 BIRC7Q96CA5 298 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 PTCD3Q96EY7 689 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF560Q96MR9 790 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TSPAN18Q96SJ8 248 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 CSNK1G1Q9HCP0 422 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TM9SF3Q9HD45 589 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 DNAJC17Q9NVM6 304 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 FANCLQ9NW38 375 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ASB6Q9NWX5 421 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 KCTD5Q9NXV2 234 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 KCND2Q9NZV8 630 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 FAM30AQ9NZY2 134 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 BCCIPQ9P287 314 aaKnown RBP eCLIP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 THAP10Q9P2Z0 257 aaPredicted RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ITGA11Q9UKX5 1188 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 INTS6Q9UL03 887 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 FREM2Q5SZK8 3169 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 NYNRINQ9P2P1 1898 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 LY6G6EA0A0G2JKS1 128 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 GOLGA6L7A0A1B0GV03 622 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 LRRIQ3A6PVS8 624 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 LAD1O00515 517 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 BCAT2O15382 392 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PAPSS1O43252 624 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 KLRC4O43908 158 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TLR5O60602 858 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TACC1O75410 805 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ZFPL1O95159 310 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 IL18RAPO95256 599 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF883P0CG24 379 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ENPP1P22413 925 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PCSK1P29120 753 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ECHS1P30084 290 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 HLA-FP30511 346 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SLC6A4P31645 630 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 HOXD12P35452 270 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PNPLA4P41247 253 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ACADVLP49748 655 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 VAV2P52735 878 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ATXN3P54252 364 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 MAP3K7CLP57077 242 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 RPS14P62263 151 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TLE3Q04726 772 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CYP24A1Q07973 514 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SRSF4Q08170 494 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TARDBPQ13148 414 aaKnown RBP eCLIP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SLC14A1Q13336 389 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 LY6DQ14210 128 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 KYAT1Q16773 422 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CCDC157Q569K6 752 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 HECTD3Q5T447 861 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ARL6IP4Q66PJ3 421 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SLC36A4Q6YBV0 504 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SCARA5Q6ZMJ2 495 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF788Q6ZQV5 615 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CLEC20AQ6ZU45 233 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 KIAA0907Q7Z7F0 614 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ADIPOR2Q86V24 386 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ERICH1Q86X53 443 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 GRAMD1CQ8IYS0 662 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CHPFQ8IZ52 775 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 FSIP1Q8NA03 581 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SLC2A14Q8TDB8 520 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SAP25Q8TEE9 199 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 NOC3LQ8WTT2 800 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TSPEARQ8WU66 669 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SCFD1Q8WVM8 642 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SREK1Q8WXA9 508 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 STON2Q8WXE9 905 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 JAKMIP2Q96AA8 810 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PRR11Q96HE9 360 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 RAX2Q96IS3 184 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TMX3Q96JJ7 454 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms