RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 GNA14O95837 355 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 C9P02748 559 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 MAN1A1P33908 653 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 KRT9P35527 623 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 ACTR1BP42025 376 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 EPHA4P54764 986 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 ACTR1AP61163 376 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 PYCR3Q53H96 274 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 STRADAQ7RTN6 431 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 KDELC2Q7Z4H8 507 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 HSD11B1LQ7Z5J1 315 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 SRRM1Q8IYB3 904 aaKnown RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 TMEM35BQ8NCS4 154 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 OR10G6Q8NH81 332 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 NUS1Q96E22 293 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 PHF12Q96QT6 1004 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 OR2M4Q96R27 311 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 NCAPGQ9BPX3 1015 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 ULBP3Q9BZM4 244 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 BRD8Q9H0E9 1235 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 ATP13A3Q9H7F0 1226 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 SARS2Q9NP81 518 aaKnown RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 UBA2Q9UBT2 640 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SMC2O95347 1197 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 CBX6O95503 412 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 CYP11B1P15538 503 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 TNFAIP3P21580 790 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SERPINA4P29622 427 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 ETV3P41162 512 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 PGDP52209 483 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 GFERP55789 205 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 DPTQ07507 201 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 PTP4A2Q12974 167 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 DNASE1L3Q13609 305 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 IL10RAQ13651 578 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 CDO1Q16878 200 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 UGT8Q16880 541 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SNAP47Q5SQN1 464 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 JMJD6Q6NYC1 403 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 LYSMD3Q7Z3D4 306 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 TECPR1Q7Z6L1 1165 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SRLQ86TD4 932 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 NOP9Q86U38 636 aaKnown RBP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 RNF31Q96EP0 1072 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 RUFY1Q96T51 708 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 BARD1Q99728 777 aaKnown RBP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 SUDS3Q9H7L9 328 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 GDPD2Q9HCC8 539 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 MOSPD1Q9UJG1 213 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 NIPBLQ6KC79 2804 aaeCLIP9.01□□□□□ -0.97
PRKCH-208ENST00000553846 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
PRKCH-208ENST00000553846 PCNX1Q96RV3 2341 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 CDC14CA4D256 554 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 LILRA5A6NI73 299 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 A8MX80 341 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 TIAF1O95411 115 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 FGF5P12034 268 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 MMP8P22894 467 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 NFKBIAP25963 317 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ERCC5P28715 1186 aaPredicted RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 EPHB2P29323 1055 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 PPP1R2P41236 205 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 GARSP41250 739 aaKnown RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 GSCP56915 257 aaPredicted RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 UBE2IP63279 158 aaKnown RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 SH3BP2P78314 561 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 HHEXQ03014 270 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 LRP8Q14114 963 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ACOX1Q15067 660 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 PTPRRQ15256 657 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 EXOC3L4Q17RC7 722 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 CRB2Q5IJ48 1285 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ISM2Q6H9L7 571 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 KLHL10Q6JEL2 608 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 IYDQ6PHW0 289 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ADAMTSL4Q6UY14 1074 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 GBP6Q6ZN66 633 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 RFLNAQ6ZTI6 216 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 Q6ZVL8 140 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ARHGAP12Q8IWW6 846 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 SLC34A3Q8N130 599 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 RBMXL3Q8N7X1 1067 aaKnown RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 ADAMTS17Q8TE56 1095 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 EPS8L1Q8TE68 723 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 CT55Q8WUE5 264 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 PDCD6IPQ8WUM4 868 aaKnown RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 C19orf60Q96EN9 201 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms