RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SLC20A1Q8WUM9 679 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 PIGSQ96S52 555 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 HERPUD2Q9BSE4 406 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ANAPC2Q9UJX6 822 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 PCOLCE2Q9UKZ9 415 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 HPSEQ9Y251 543 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 H7C0S8 307 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MYL9P24844 172 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ELK4P28324 431 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 CDH5P33151 784 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 HSPA14Q0VDF9 509 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 TMEM132BQ14DG7 1078 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 USP17L2Q6R6M4 530 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 C15orf52Q6ZUT6 534 aaKnown RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MB21D2Q8IYB1 491 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 DLG3Q92796 817 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 CHCHD6Q9BRQ6 235 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 RIOK2Q9BVS4 552 aaKnown RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 CPNE5Q9HCH3 593 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC9A3R1O14745 358 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 PGK1P00558 417 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 PRKAR1AP10644 381 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 WSCD2Q2TBF2 565 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 FRMD5Q7Z6J6 570 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ZSCAN1Q8NBB4 408 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 RSC1A1Q92681 617 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MYLPFQ96A32 169 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MROQ9BYG7 248 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 AP5M1Q9H0R1 490 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ACTL8Q9H568 366 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 KLHL1Q9NR64 748 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ZSCAN32Q9NX65 697 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 GON4LQ3T8J9 2241 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 RPTORQ8N122 1335 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 NIPSNAP2O75323 286 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 IL1BP01584 269 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 VAMP1P23763 118 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 CDH13P55290 713 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 CCNIQ14094 377 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 GRB14Q14449 540 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 DUPD1Q68J44 220 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ADGRD2Q7Z7M1 963 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 FAM83FQ8NEG4 500 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 FRMD6Q96NE9 622 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 RMDN3Q96TC7 470 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF395Q9H8N7 513 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 SAE1Q9UBE0 346 aaPredicted RBP8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 MICAL3Q7RTP6 2002 aa8.99□□□□□ -0.97
GTF2A1-203ENST00000553612 ATP6AP2A0A1C7CYW4 349 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 EFCAB9A8MZ26 197 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 HRGP04196 525 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SERPINA6P08185 405 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CYP2A6P11509 494 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 GLDCP23378 1020 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 DNAJA1P31689 397 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 TWF1Q12792 350 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 NCF4Q15080 339 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 DSELQ8IZU8 1212 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 LIX1Q8N485 282 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZFP14Q9HCL3 533 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 DDX4Q9NQI0 724 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 GNG8Q9UK08 70 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PEX16Q9Y5Y5 336 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 HECW1Q76N89 1606 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MYMKA6NI61 221 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 M0R233 179 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 AKR7A2O43488 359 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 IL18RAPO95256 599 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 VAPBO95292 243 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 S100PP25815 95 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SP2Q02086 613 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PRKG2Q13237 762 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ORC1Q13415 861 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF169Q14929 603 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FSCN1Q16658 493 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 AGAP6Q5VW22 663 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZER1Q7Z7L7 766 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PGBD3Q8N328 593 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 NDNFQ8TB73 568 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 AP2M1Q96CW1 435 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 AGAP4Q96P64 663 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ILKAPQ9H0C8 392 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 KCNK13Q9HB14 408 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PDGFCQ9NRA1 345 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SAGE1Q9NXZ1 904 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MXD1Q05195 221 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SCN1BQ07699 218 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC6A19Q695T7 634 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SZRD1Q7Z422 152 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 BTLAQ7Z6A9 289 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CCDC71Q8IV32 467 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 BEND7Q8N7W2 519 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 TREX2Q9BQ50 279 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms