RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR1E3Q8WZA6 343 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 CLPBQ9H078 707 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 ABCG4Q9H172 646 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 FAM83DQ9H4H8 585 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 TRABDQ9H4I3 376 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 MOSPD1Q9UJG1 213 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 LOC285095A0A1B0GVY8 99 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 PRSS38A1L453 326 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-204ENST00000553324 ANXA9O76027 345 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 FTCDO95954 541 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 PROS1P07225 676 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 NFKB1P19838 968 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 WNT3AP56704 352 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 GALNT3Q14435 633 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 PRPSAP1Q14558 356 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 GATA6Q92908 595 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 NAT6Q93015 286 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 SCAMP4Q969E2 229 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 LRRC45Q96CN5 670 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 HIC2Q96JB3 615 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 GPR63Q9BZJ6 419 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 CYP4F12Q9HCS2 524 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 FGF22Q9HCT0 170 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 TRNAU1APQ9NX07 287 aaKnown RBP15.28■□□□□ 0.04
SHMT2-204ENST00000553324 UBP1Q9NZI7 540 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 RSPH14Q9UHP6 348 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 CD84Q9UIB8 345 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 SLC17A4Q9Y2C5 497 aa15.28■□□□□ 0.04
SHMT2-204ENST00000553324 AAR2Q9Y312 384 aaKnown RBP15.28■□□□□ 0.04
SHMT2-204ENST00000553324 A0A0U1RQJ8 604 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6L3A6NEY3 463 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 CEACAM5P06731 702 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 HLA-DPA1P20036 260 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 ZDHHC20Q5W0Z9 365 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 TMC3Q7Z5M5 1100 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 TAF8Q7Z7C8 310 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 PELI3Q8N2H9 469 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 ARL10Q8N8L6 244 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 WDR48Q8TAF3 677 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 PDXPQ96GD0 296 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 ALS2CR12Q96Q35 445 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 SMIM14Q96QK8 99 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 RIOK2Q9BVS4 552 aaKnown RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 FRMD8Q9BZ67 464 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 CARS2Q9HA77 564 aaKnown RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 HACD3Q9P035 362 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 PACSIN2Q9UNF0 486 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-204ENST00000553324 GPR34Q9UPC5 381 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 CAPN6Q9Y6Q1 641 aa15.27■□□□□ 0.04
SHMT2-204ENST00000553324 ANKRD36A6QL64 1941 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 A0A0U1RQS6 177 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 CPED1A4D0V7 1026 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 C1QTNF9BB2RNN3 333 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 KCNN4O15554 427 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 SOD1P00441 154 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 IVLP07476 585 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 C1QTNF9P0C862 333 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 GEMP55040 296 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 DCDC1P59894 354 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ILF3Q12906 894 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ANKRD20A2Q5SQ80 823 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 HENMT1Q5T8I9 393 aaKnown RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 SEL1L2Q5TEA6 688 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ANKRD20A1Q5TYW2 823 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ANKRD20A3Q5VUR7 823 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 PDPK2PQ6A1A2 396 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 AADACL2Q6P093 401 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 KDELC1Q6UW63 502 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 RFLNAQ6ZTI6 216 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 LYSMD3Q7Z3D4 306 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 KDF1Q8NAX2 398 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 FAM46DQ8NEK8 389 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 SCARF2Q96GP6 870 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 HERPUD2Q9BSE4 406 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ZSCAN5AQ9BUG6 496 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 FSD1LQ9BXM9 530 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 TMEM121BQ9BXQ6 578 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 TMEM168Q9H0V1 697 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 GBA3Q9H227 469 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 CAAP1Q9H8G2 361 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 MRPL40Q9NQ50 206 aaKnown RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 PADI4Q9UM07 663 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 SHOC2Q9UQ13 582 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 CLCA2Q9UQC9 943 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ARID1BQ8NFD5 2236 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-204ENST00000553324 ASPMQ8IZT6 3477 aa15.26■□□□□ 0.03
SHMT2-204ENST00000553324 TPRP12270 2363 aaKnown RBP15.25■□□□□ 0.03
SHMT2-204ENST00000553324 LY6G6EA0A0G2JKS1 128 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 C5orf60A6NFR6 353 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 OPA1O60313 960 aa15.25■□□□□ 0.03
SHMT2-204ENST00000553324 HMGCLP35914 325 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms