RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CFAP57Q96MR6 1250 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 WDR77Q9BQA1 342 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 PCGF1Q9BSM1 259 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 OPA3Q9H6K4 179 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 TASP1Q9H6P5 420 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 GPR108Q9NPR9 543 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 HINT3Q9NQE9 182 aaKnown RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 SELENONQ9NZV5 590 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 CRNNQ9UBG3 495 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 UBA2Q9UBT2 640 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-209ENST00000553280 OSGIN1Q9UJX0 560 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 FBXW11Q9UKB1 542 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 BTBD3Q9Y2F9 522 aa5.11□□□□□ -1.59
SCFD1-209ENST00000553280 TRBC2A0A5B9 178 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 A6NNC1 897 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 PPP6CO00743 305 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ATP2A1O14983 1001 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 KLKB1P03952 638 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 HSP90AB1P08238 724 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CD58P19256 250 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 MUTP22033 750 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 GPTP24298 496 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CERS1P27544 350 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 HOXC9P31274 260 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 METAP2P50579 478 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CCR3P51677 355 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ELLP55199 621 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 PROK1P58294 105 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ID2Q02363 134 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 GAD2Q05329 585 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 SLC10A2Q12908 348 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 NEDD9Q14511 834 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 IL11RAQ14626 422 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 DAZAP2Q15038 168 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CEP78Q5JTW2 689 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ANKRD54Q6NXT1 300 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 METTL2BQ6P1Q9 378 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF793Q6ZN11 406 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF788Q6ZQV5 615 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 TAOK1Q7L7X3 1001 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 OR6J1Q8NGC5 347 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 GOT1L1Q8NHS2 421 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM174Q8WUU8 243 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 SLC35F5Q8WV83 523 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 VOPP1Q96AW1 172 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 METTL2AQ96IZ6 378 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 NUDCD1Q96RS6 583 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 MMP27Q9H306 513 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 ESRP2Q9H6T0 727 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 MAGIXQ9H6Y5 334 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 MAP6D1Q9H9H5 199 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 GRPEL1Q9HAV7 217 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CISD1Q9NZ45 108 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 MSRB1Q9NZV6 116 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 DNAJB4Q9UDY4 337 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 TUBE1Q9UJT0 475 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 GTF3C4Q9UKN8 822 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 WBP11Q9Y2W2 641 aaKnown RBP5.1□□□□□ -1.59
SCFD1-209ENST00000553280 CLIC4Q9Y696 253 aa5.1□□□□□ -1.59
SCFD1-209ENST00000553280 FLT1P17948 1338 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 MANSC4A6NHS7 340 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF814B7Z6K7 855 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 H3BQ06 376 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 VCYO14598 125 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CLGNO14967 610 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 SMAD9O15198 467 aaKnown RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 PLRG1O43660 514 aaKnown RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 TLR2O60603 784 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ATG13O75143 517 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CNOT3O75175 753 aaKnown RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 BCAR3O75815 825 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 IFNA2P01563 188 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CHRNB1P11230 501 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CHRNB2P17787 502 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 RAD23BP54727 409 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 RBP5P82980 135 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ADORA2A-AS1P86434 159 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ECT2LQ008S8 904 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF91Q05481 1191 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 DDR1Q08345 913 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ST3GAL1Q11201 340 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 GRSF1Q12849 480 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 BFSP1Q12934 665 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 GRIK2Q13002 908 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 PNLIPRP3Q17RR3 467 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CST9LP1Q5W188 147 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 NUGGCQ68CJ6 796 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 PTF1AQ7RTS3 328 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CACNA2D4Q7Z3S7 1137 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CEP97Q8IW35 865 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 THNSL1Q8IYQ7 743 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 OR8H3Q8N146 312 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 SPATA6LQ8N4H0 392 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 BOLLQ8N9W6 283 aaKnown RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 GPT2Q8TD30 523 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ERGIC1Q969X5 290 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 DACH2Q96NX9 599 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 RAB3IPQ96QF0 476 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms