RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BRAT1Q6PJG6 821 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 YAF2Q8IY57 180 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 FAM45AQ8TCE6 357 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 GRAMD1AQ96CP6 724 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 TSPAN17Q96FV3 270 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 FAM96AQ9H5X1 160 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 ARNTLO00327 626 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 KLHL2O95198 593 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 SBK3P0C264 359 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 KCNA4P22459 653 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 FDXRP22570 491 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 LHCGRP22888 699 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 MTHFRP42898 656 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 ST8SIA6P61647 398 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 GRIN2CQ14957 1233 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 CHI3L2Q15782 390 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 LRRC66Q68CR7 880 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 TRIM42Q8IWZ5 723 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 KDM1BQ8NB78 822 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 RAB3IL1Q8TBN0 382 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 NXNL1Q96CM4 212 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 IL26Q9NPH9 171 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 IL36AQ9UHA7 158 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 RUVBL2Q9Y230 463 aaKnown RBP19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 TSPAN11A1L157 253 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 G3V2L1 256 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 BPIP17213 487 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 TTPAP49638 278 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 PTSQ03393 145 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 CACNG1Q06432 222 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 BST1Q10588 318 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 ZRANB3Q5FWF4 1079 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 TMEM207Q6UWW9 146 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 SPATA21Q7Z572 469 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 C10orf107Q8IVU9 208 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 SPATA6LQ8N4H0 392 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 CCDC197Q8NCU1 140 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 LRIG1Q96JA1 1093 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 UBXN10Q96LJ8 280 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 AARSD1Q9BTE6 412 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 TSSK1BQ9BXA7 367 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 IGSF5Q9NSI5 407 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 MED16Q9Y2X0 877 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 MTF2Q9Y483 593 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 TARM1B6A8C7 271 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 NDUFS3O75489 264 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 ECI2O75521 394 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 SRP72O76094 671 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 IL1BP01584 269 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 FGF3P11487 239 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 CPA3P15088 417 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 GDI1P31150 447 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 SUOXP51687 545 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 POLR2LP62875 67 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 PIM3Q86V86 326 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 CBARPQ8N350 705 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 FSTL5Q8N475 847 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 SMRP1Q8NCR6 262 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 BIRC8Q96P09 236 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 OSBPL1AQ9BXW6 950 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 GPAMQ9HCL2 828 aa19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 USP15Q9Y4E8 981 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-215ENST00000553186 TK2O00142 265 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 PRAMEF1O95521 474 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 POU3F3P20264 500 aaPredicted RBP19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 GLRBP48167 497 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 LRRC73Q5JTD7 316 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 RNF187Q5TA31 235 aaPredicted RBP19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 C6orf89Q6UWU4 347 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 FAM151BQ6UXP7 276 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 HEXDCQ8WVB3 486 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 ANKRD49Q8WVL7 239 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 TMEM245Q9H330 911 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 CPSF2Q9P2I0 782 aaKnown RBP19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 B4GALT6Q9UBX8 382 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 VPS9D1Q9Y2B5 631 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
RBFOX1-215ENST00000553186 UBA6A0AVT1 1052 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 OR1I1O60431 355 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 CHRM1P11229 460 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 EIF2DP41214 584 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 HNRNPH2P55795 449 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 HNRNPA1L2Q32P51 320 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 LRIT3Q3SXY7 679 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 AARS2Q5JTZ9 985 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ATG16L1Q676U5 607 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 LRRC8EQ6NSJ5 796 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ZCCHC23Q6ZST2 131 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 CCDC91Q7Z6B0 441 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 TBC1D1Q86TI0 1168 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 OR6Y1Q8NGX8 325 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 TSNARE1Q96NA8 513 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 TRMT61BQ9BVS5 477 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 C20orf27Q9GZN8 174 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 APPL1Q9UKG1 709 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 TBC1D3BA6NDS4 549 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 SNNO75324 88 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 APOA4P06727 396 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 FMO4P31512 558 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 CA5AP35218 305 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms