RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 H3BMM5 538 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 J3QRK9 145 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PIP5K1BO14986 540 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 KPNA6O60684 536 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ZBTB7AO95365 584 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 SNAP29O95721 258 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FUCA1P04066 466 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 HSD17B1P14061 328 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MATN1P21941 496 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 DCKP27707 260 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MAGEA8P43361 318 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ZFP36L2P47974 494 aaKnown RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ATP4BP51164 291 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 DIO3P55073 304 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MLLT10P55197 1068 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 WNT3AP56704 352 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 RAB15P59190 212 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MAXP61244 160 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ATP6V0D1P61421 351 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ECT2LQ008S8 904 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ZNF33AQ06730 810 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 SFSWAPQ12872 951 aaKnown RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 EIF4EBP2Q13542 120 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PTPRCAPQ14761 206 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 SNX17Q15036 470 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 POLD3Q15054 466 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PLCL1Q15111 1095 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 NEDD8Q15843 81 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 KIF19Q2TAC6 998 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 AGAP9Q5VTM2 703 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 LCN8Q6JVE9 175 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 KDELC1Q6UW63 502 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 KCTD8Q6ZWB6 473 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 IFNEQ86WN2 208 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ERO1BQ86YB8 467 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CCDC117Q8IWD4 279 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 AQP12AQ8IXF9 295 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PCYOX1LQ8NBM8 494 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TNIP2Q8NFZ5 429 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 OR52K2Q8NGK3 314 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 DQX1Q8TE96 717 aaKnown RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 VPS33AQ96AX1 596 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FBXL8Q96CD0 374 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MYRFLQ96LU7 910 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PAAF1Q9BRP4 392 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FSD1LQ9BXM9 530 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ARMC7Q9H6L4 198 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TMEM165Q9HC07 324 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 INIPQ9NRY2 104 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TBC1D13Q9NVG8 400 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MPP6Q9NZW5 540 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 NUDT5Q9UKK9 219 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 BTRCQ9Y297 605 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CRYL1Q9Y2S2 319 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PCDHA9Q9Y5H5 950 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FADS3Q9Y5Q0 445 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CORINQ9Y5Q5 1042 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PLXNB2O15031 1838 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 DICER1Q9UPY3 1922 aaKnown RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 KANSL1LA0AUZ9 987 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TNFRSF10AO00220 468 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MATN3O15232 486 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 INPP4BO15327 924 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CLOCKO15516 846 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 GJB3O75712 270 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ANXA9O76027 345 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 RASAL1O95294 804 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 S1PR4O95977 384 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PEX11BO96011 259 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 F9P00740 461 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 RBP1P09455 135 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MTHFD2P13995 350 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 GFAPP14136 432 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ZNF182P17025 639 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PAMP19021 973 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FUT4P22083 530 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 UGT1A1P22309 533 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 UGT1A4P22310 534 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 FASP25445 335 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 AXLP30530 894 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TTKP33981 857 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 UGT1A3P35503 534 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 UGT1A5P35504 534 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CD97P48960 835 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CBX3Q13185 183 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ACAP2Q15057 778 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 OR4D1Q15615 310 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MAP7D1Q3KQU3 841 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 PAGE3Q5JUK9 113 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ANKRD26P1Q6NSI1 321 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 ZNF549Q6P9A3 640 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 C14orf80Q86SX3 495 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 CILP2Q8IUL8 1156 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 DDIASQ8IXT1 998 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 MINDY1Q8N5J2 469 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 TRPV3Q8NET8 790 aa5.41□□□□□ -1.54
LIMA1-212ENST00000552491 SCAMP5Q8TAC9 235 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms