RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 POLR3CQ9BUI4 534 aaPredicted RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TM6SF1Q9BZW5 370 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 CCSER1Q9C0I3 900 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LMAN1LQ9HAT1 526 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 GOLGA2P5Q9HBQ8 144 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 NOD2Q9HC29 1040 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 UBN1Q9NPG3 1134 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TRIM36Q9NQ86 728 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PRDM8Q9NQV8 689 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KLC4Q9NSK0 619 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM30AQ9NV96 361 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 DKK2Q9UBU2 259 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 LPAR3Q9UBY5 353 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SEC63Q9UGP8 760 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 VPS51Q9UID3 782 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 KCNJ14Q9UNX9 436 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 C19orf53Q9UNZ5 99 aaPredicted RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 NME7Q9Y5B8 376 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 ASCC3Q8N3C0 2202 aaKnown RBP2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PATJQ8NI35 1801 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 PTPRQQ9UMZ3 2332 aa2.51□□□□□ -2.01
CPSF6-207ENST00000551516 SPENQ96T58 3664 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ATG2BQ96BY7 2078 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 LNP1A1A4G5 178 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BCLAF3A2AJT9 711 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CASTOR2A6NHX0 329 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC69A6NI79 296 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 A8MVJ9 347 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 HEPACAM2A8MVW5 462 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 B9A039 149 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 H0Y3Z8 333 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 I3L4J1 428 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 K7EQS6 105 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PIRO00625 290 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CHADO15335 359 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 YY2O15391 372 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PROM1O43490 865 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PFKFB2O60825 505 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PPP6R2O75170 966 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 KRT38O76015 456 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OLFM2O95897 454 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 AGR2O95994 175 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PIGRP01833 764 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PRKCBP05771 671 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 URODP06132 367 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FESP07332 822 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CHRM2P08172 466 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PDHA1P08559 390 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 DLDP09622 509 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 EGR2P11161 476 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CREB1P16220 341 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GJA1P17302 382 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PSMC3P17980 439 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ATF6P18850 670 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 DRD1P21728 446 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BCKDHBP21953 392 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MMP8P22894 467 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CCNE1P24864 410 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 RPA1P27694 616 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SERPINA4P29622 427 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GNA11P29992 359 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 DDIT3P35638 169 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OPRD1P41143 372 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OR1G1P47890 313 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CXCL12P48061 93 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF131P52739 623 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BLOC1S1P78537 153 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SLC25A3Q00325 362 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BNC1Q01954 994 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SEMA3BQ13214 749 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GPR17Q13304 367 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CUL4BQ13620 913 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FHL3Q13643 280 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BMPR2Q13873 1038 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MXD4Q14582 209 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ACOX1Q15067 660 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PTPRRQ15256 657 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PSMD5Q16401 504 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D25Q3MII6 688 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PLAC9Q5JTB6 97 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SPDYAQ5MJ70 313 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SPOUT1Q5T280 376 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 INTS11Q5TA45 600 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 STPG1Q5TH74 334 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FAM171A1Q5VUB5 890 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 DENND2CQ68D51 928 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TCEAL6Q6IPX3 200 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GALNT17Q6IS24 598 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NOTUMQ6P988 496 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 VWA1Q6PCB0 445 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 LVRNQ6Q4G3 990 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CRELD2Q6UXH1 353 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF852Q6ZMS4 543 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TPRG1Q6ZUI0 275 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TTLL10Q6ZVT0 673 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MTSS1LQ765P7 747 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 RUFY3Q7L099 469 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 RRAGAQ7L523 313 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GET4Q7L5D6 327 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CATSPER4Q7RTX7 472 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms