RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CACNA2D3Q8IZS8 1091 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 GPATCH11Q8N954 259 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 CCDC63Q8NA47 563 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 SMRP1Q8NCR6 262 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-217ENST00000550483 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 PLEKHG4BQ96PX9 1271 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 MYADMQ96S97 322 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 OMDQ99983 421 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 PITPNM3Q9BZ71 974 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 SYTL2Q9HCH5 934 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 TRPV5Q9NQA5 729 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 FBXO6Q9NRD1 293 aaPredicted RBP12.55□□□□□ -0.4
CACNB3-217ENST00000550483 PKD2L2Q9NZM6 624 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 SIRPGQ9P1W8 387 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 SLC17A7Q9P2U7 560 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 KCTD3Q9Y597 815 aa12.55□□□□□ -0.4
CACNB3-217ENST00000550483 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 PSMD11O00231 422 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 EDF1O60869 148 aaKnown RBP12.54□□□□□ -0.4
CACNB3-217ENST00000550483 HAUS5O94927 633 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 KLHL2O95198 593 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 TGDSO95455 350 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ESR1P03372 595 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 PROCP04070 461 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 PRKCGP05129 697 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 UGT2B4P06133 528 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 BPGMP07738 259 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 RBP1P09455 135 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 SLC35E2BP0CK96 405 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
CACNB3-217ENST00000550483 VIPR1P32241 457 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 GJA4P35212 333 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 HNF1BP35680 557 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 SKIV2L2P42285 1042 aaKnown RBP12.54□□□□□ -0.4
CACNB3-217ENST00000550483 TMPRSS15P98073 1019 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ITGA9Q13797 1035 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ITIH4Q14624 930 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CDKN3Q16667 212 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 HNRNPA1L2Q32P51 320 aaKnown RBP12.54□□□□□ -0.4
CACNB3-217ENST00000550483 FNDC3BQ53EP0 1204 aaKnown RBP12.54□□□□□ -0.4
CACNB3-217ENST00000550483 HECTD2Q5U5R9 776 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ERAP2Q6P179 960 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CDHR3Q6ZTQ4 885 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CMC1Q7Z7K0 106 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 C12orf40Q86WS4 652 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 LRRC34Q8IZ02 419 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 KIRREL3Q8IZU9 778 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 GJD3Q8N144 294 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 PHTF2Q8N3S3 785 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 OR6K2Q8NGY2 324 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 SUSD6Q92537 303 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ULK4Q96C45 1275 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CCDC126Q96EE4 140 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 C7orf26Q96N11 449 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 SIKE1Q9BRV8 207 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 MLXIPLQ9NP71 852 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 FKBPLQ9UIM3 349 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 CD207Q9UJ71 328 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
CACNB3-217ENST00000550483 GLYATL1P3A0A0U1RQE8 302 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 TBC1D3BA6NDS4 549 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 UPK3BL1B0FP48 263 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 C1QTNF3-AMACRE9PGA6 284 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 H0Y858 1186 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 AURKAO14965 403 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 BNIP3LO60238 219 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 SRP72O76094 671 aaKnown RBP12.53□□□□□ -0.4
CACNB3-217ENST00000550483 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.4
CACNB3-217ENST00000550483 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
CACNB3-217ENST00000550483 CTPS1P17812 591 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 FDXRP22570 491 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 RPS3P23396 243 aaKnown RBP eCLIP12.53□□□□□ -0.4
CACNB3-217ENST00000550483 GDI1P31150 447 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 OPRD1P41143 372 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 TAS2R39P59534 338 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 DCDC1P59894 354 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 XIAPP98170 497 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 CRY1Q16526 586 aa12.53□□□□□ -0.4
CACNB3-217ENST00000550483 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1164 ms