RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ACADVLP49748 655 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ACTR3P61158 418 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 IRX4P78413 519 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 GRIK2Q13002 908 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF460Q14592 562 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 CDKL4Q5MAI5 379 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 CTSL3PQ5NE16 218 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 IRAK1BP1Q5VVH5 260 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 RASGRP3Q8IV61 690 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■■■ 139.2
RAB5B-206ENST00000549505 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 WFDC5Q8TCV5 224 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF641Q96N77 438 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 YME1L1Q96TA2 773 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 CCT7Q99832 543 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ACTL7AQ9Y615 435 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 A0A0J9YYE9 177 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 RGSL1A5PLK6 1076 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 H0Y626 953 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 TRBC1P01850 177 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 CAPNS1P04632 268 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 PRR35P0CG20 571 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 THRAP10827 490 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 KCNA5P22460 613 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 PPARGP37231 505 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 KCNC1P48547 511 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 COPAP53621 1224 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 PLEKHG6Q3KR16 790 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 LSM12Q3MHD2 195 aaKnown RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 KANK2Q63ZY3 851 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 TXNDC8Q6A555 127 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 PSRC1Q6PGN9 363 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 CYHR1Q6ZMK1 362 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 OR4K2Q8NGD2 314 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 BLOC1S5Q8TDH9 187 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 EID2BQ96D98 161 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ZBED2Q9BTP6 218 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 SLC46A2Q9BY10 475 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ZBTB26Q9HCK0 441 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 TAS2R13Q9NYV9 303 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 ARMCX1Q9P291 453 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 IGLV3-16A0A075B6K0 115 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 A8MUI8 341 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 B2RBV5 119 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 H3BMM5 538 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 CBX4O00257 560 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SNAP91O60641 907 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 FGBP02675 491 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 LRG1P02750 347 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 RAG1P15918 1043 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 PAX7P23759 505 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 GABRR2P28476 465 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 AVPR1AP37288 418 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SCNN1BP51168 640 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 CLCN7P51798 805 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 LMAN2Q12907 356 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 GBX1Q14549 363 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF77Q15935 545 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 TAF12Q16514 161 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SPATS1Q496A3 300 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 GPR33Q49SQ1 333 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 TMEM240Q5SV17 173 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SPOUT1Q5T280 376 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 ACAD11Q709F0 780 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 KLHL23Q8NBE8 558 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SHKBP1Q8TBC3 707 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 MYO19Q96H55 970 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 OR52B2Q96RD2 323 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NDNQ99608 321 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NUSAP1Q9BXS6 441 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NDE1Q9NXR1 346 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NOP53Q9NZM5 478 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 CPSF2Q9P2I0 782 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 STX18Q9P2W9 335 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 MARCOQ9UEW3 520 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 INTS6Q9UL03 887 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 CDYLQ9Y232 598 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 BPTFQ12830 3046 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 C8AP07357 584 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 F7P08709 466 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 KITP10721 976 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 COX4I1P13073 169 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 PKMP14618 531 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 HTRA3P83110 453 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 CSHL1Q14406 222 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 UGT3A1Q6NUS8 523 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 MACC1Q6ZN28 852 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 LARP4Q71RC2 724 aaKnown RBP eCLIP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 SCUBE1Q8IWY4 988 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 HS6ST3Q8IZP7 471 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 ELMOD1Q8N336 334 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 AFAP1L2Q8N4X5 818 aa9.94□□□□□ -0.82
RAB5B-206ENST00000549505 PCDH20Q8N6Y1 951 aaKnown RBP9.94□□□□□ -0.82
RAB5B-206ENST00000549505 OR6P1Q8NGX9 317 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms