RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KCTD16Q68DU8 428 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 ERAP2Q6P179 960 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 ENPP7Q6UWV6 458 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 ZNF354CQ86Y25 554 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 ART4Q93070 314 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 TRIM11Q96F44 468 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 CCDC74BQ96LY2 380 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 KCTD15Q96SI1 283 aaPredicted RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 SNRNP25Q9BV90 132 aaKnown RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 GPN2Q9H9Y4 310 aaPredicted RBP12.2□□□□□ -0.46
DDX54-206ENST00000549271 AP4E1Q9UPM8 1137 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 KCNMB2Q9Y691 235 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 SCINQ9Y6U3 715 aa12.2□□□□□ -0.46
DDX54-206ENST00000549271 NF1P21359 2839 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
DDX54-206ENST00000549271 PIGNO95427 931 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 CYP1A2P05177 515 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 TCF4P15884 667 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 IL1R2P27930 398 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 LIG3P49916 1009 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 KIAA1024LP59773 190 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 NSUN2Q08J23 767 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX54-206ENST00000549271 TRA2AQ13595 282 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX54-206ENST00000549271 INPP5AQ14642 412 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 NR1D2Q14995 579 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 C1QL3Q5VWW1 255 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
DDX54-206ENST00000549271 ZNF438Q7Z4V0 828 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 FAM46DQ8NEK8 389 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 PDXPQ96GD0 296 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 EXOC2Q96KP1 924 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 WDR92Q96MX6 357 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 NCAPGQ9BPX3 1015 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 EFHD1Q9BUP0 239 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 ASPSCR1Q9BZE9 553 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 THAP2Q9H0W7 228 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
DDX54-206ENST00000549271 MRPL47Q9HD33 250 aaKnown RBP12.19□□□□□ -0.46
DDX54-206ENST00000549271 KLQ9UEF7 1012 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 COQ6Q9Y2Z9 468 aa12.19□□□□□ -0.46
DDX54-206ENST00000549271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.466e-14■■■□□ 16.4
DDX54-206ENST00000549271 TNRC6AQ8NDV7 1962 aaKnown RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 B4E171 279 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 MKRN2OSH3BPM6 223 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 J3KR12 359 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TNFRSF10CO14798 259 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 PRPSAP2O60256 369 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 RNF8O76064 485 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TNFP01375 233 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 DESP17661 470 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 MAP4P27816 1152 aaKnown RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 PCK1P35558 622 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TRIM23P36406 574 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TSPAN7P41732 249 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 LIMK2P53671 638 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 OR1D5P58170 312 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TPI1P60174 286 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 MC1RQ01726 317 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 RFTN1Q14699 578 aaPredicted RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 ASTE1Q2TB18 679 aaPredicted RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 AMZ1Q400G9 498 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 ATP1A1-AS1Q5TC04 95 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 AFMIDQ63HM1 303 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 ASB18Q6ZVZ8 466 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 TAF8Q7Z7C8 310 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 SRLQ86TD4 932 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 ZSWIM9Q86XI8 627 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 CAMK1DQ8IU85 385 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 PSTKQ8IV42 348 aaKnown RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 SRRM1Q8IYB3 904 aaKnown RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 CCDC13Q8IYE1 715 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 NLGN4YQ8NFZ3 816 aaPredicted RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 CPT1CQ8TCG5 803 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 KIAA1143Q96AT1 154 aaPredicted RBP12.18□□□□□ -0.46
DDX54-206ENST00000549271 BTBD6Q96KE9 485 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 ATP13A3Q9H7F0 1226 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 SLC39A1Q9NY26 324 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 OR1A2Q9Y585 309 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 KCTD3Q9Y597 815 aa12.18□□□□□ -0.46
DDX54-206ENST00000549271 ARHGAP42A6NI28 874 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 TTLL8A6PVC2 850 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 B4DGG1 531 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 EEF2KO00418 725 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 CBFA2T2O43439 604 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms