RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 STX7O15400 261 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ADAM12O43184 909 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ALDOCP09972 364 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 OR1D2P34982 312 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 FCGRTP55899 365 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 AAK1Q2M2I8 961 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 UNC50Q53HI1 259 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ARMC12Q5T9G4 340 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ARMC3Q5W041 872 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT3A1Q6NUS8 523 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 RGMBQ6NW40 437 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 LRRC43Q8N309 656 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 CLDN19Q8N6F1 224 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 BTN2A3PQ96KV6 586 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 EIF2B4Q9UI10 523 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 NEU3Q9UQ49 428 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC45A1Q9Y2W3 748 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TARM1B6A8C7 271 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CLGNO14967 610 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 FOXD2O60548 495 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CDK14O94921 469 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 FAM58BPP0C7Q3 252 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 EEF1B2P24534 225 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CYP2C18P33260 490 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 OXCT1P55809 520 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 PLCL1Q15111 1095 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 BBS5Q8N3I7 341 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 FAM47BQ8NA70 645 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 OR10Q1Q8NGQ4 319 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CLHC1Q8NHS4 586 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC30A3Q99726 388 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 SH3GL3Q99963 347 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 PRDM16Q9HAZ2 1276 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 GON4LQ3T8J9 2241 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 SEPT4O43236 478 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 ALDH2P05091 517 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 RHOCP08134 193 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 ALPIP09923 528 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 CKBP12277 381 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 TACR2P21452 398 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 YAP1P46937 504 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 RAB27AP51159 221 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 RETREG3Q86VR2 466 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 PPM1MQ96MI6 270 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 HGH1Q9BTY7 390 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 GSTO2Q9H4Y5 243 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 PFDN4Q9NQP4 134 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 C6orf203Q9P0P8 240 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 NDUFAF1Q9Y375 327 aa13.63□□□□□ -0.23
PRPF40B-209ENST00000548825 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 LDB2O43679 373 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 COL6A2P12110 1019 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 GDF5P43026 501 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PLD1Q13393 1074 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 SQLEQ14534 574 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ACAP2Q15057 778 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 CBR4Q8N4T8 237 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ABTB1Q969K4 478 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TMIGD2Q96BF3 282 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 CDKN2AIPNLQ96HQ2 116 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TBCDQ9BTW9 1192 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC25A23Q9BV35 468 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 GPR63Q9BZJ6 419 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ZFP14Q9HCL3 533 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNHIT2Q9UHR6 403 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 FCF1Q9Y324 198 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PCDHB7Q9Y5E2 793 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 H3BSA7 217 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 AHCYL1O43865 530 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 MMP2P08253 660 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 MC4RP32245 332 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 SGSHP51688 502 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PSAPL1Q6NUJ1 521 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 FAM151BQ6UXP7 276 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PIANPQ8IYJ0 282 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 LINGO1Q96FE5 620 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 EFHD1Q9BUP0 239 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 LATS2Q9NRM7 1088 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TAS2R13Q9NYV9 303 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 UBA2Q9UBT2 640 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 KPNA6O60684 536 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 OR4F21O95013 312 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 NFKBIAP25963 317 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms