RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 STAT4Q14765 748 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 RTP5Q14D33 572 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 TPSAB1Q15661 275 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 NAPEPLDQ6IQ20 393 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 PPP1R21Q6ZMI0 780 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 KLHDC8BQ8IXV7 354 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 PPIL6Q8IXY8 311 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 LPCAT1Q8NF37 534 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 CPT1BQ92523 772 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 ADGRE3Q9BY15 652 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
HDAC7-226ENST00000547259 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 A0A1W2PR77 199 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ESYT3A0FGR9 886 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 PLK4O00444 970 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 HTRA2O43464 458 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 USP12O75317 370 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 TMEM63AO94886 807 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 SEC31AO94979 1220 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 PGLSO95336 258 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 NDST3O95803 873 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 CKMT2P17540 419 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 METAP1P53582 386 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ITGA8P53708 1063 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ADPRHP54922 357 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 NXPH1P58417 271 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 TUBB4BP68371 445 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 SARNPP82979 210 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 OLIG2Q13516 323 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ANKRD22Q5VYY1 191 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 DUPD1Q68J44 220 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 BRAT1Q6PJG6 821 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 LAYNQ6UX15 382 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 PARS2Q7L3T8 475 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 LINC00523Q86TU6 105 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 GATAD2AQ86YP4 633 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 SLC25A41Q8N5S1 370 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ARRDC3Q96B67 414 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 APOL2Q9BQE5 337 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 EPB41L5Q9HCM4 733 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 EVA1BQ9NVM1 165 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 WHRNQ9P202 907 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 SERGEFQ9UGK8 458 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 DMGDHQ9UI17 866 aaKnown RBP12.09□□□□□ -0.47
HDAC7-226ENST00000547259 ANAPC5Q9UJX4 755 aa12.09□□□□□ -0.47
HDAC7-226ENST00000547259 TDRD6O60522 2096 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 TCRBV7S3A2A0A539 114 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 TSPAN11A1L157 253 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 C10orf142B7Z368 130 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 PRAMEF26H0Y7S4 382 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 GOLGA8MH3BSY2 632 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 FZD6O60353 706 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 SUN1O94901 812 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 AGTP01019 485 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 WNT1P04628 370 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 FGF1P05230 155 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 PDHA1P08559 390 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 ITIH2P19823 946 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NFKBIAP25963 317 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 IVDP26440 423 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 EIF2S3P41091 472 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 MAGEA6P43360 314 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 CHRNA4P43681 627 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 ACADVLP49748 655 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NEK3P51956 506 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 RPL26P61254 145 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 POLR2LP62875 67 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 CDK16Q00536 496 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 CNTN1Q12860 1018 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 MORF4L2Q15014 288 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 SLC1A5Q15758 541 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NEK5Q6P3R8 708 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
HDAC7-226ENST00000547259 HOOK3Q86VS8 718 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 ZSWIM9Q86XI8 627 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NDUFAF2Q8N183 169 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 AADATQ8N5Z0 425 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 NAT8LQ8N9F0 302 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
HDAC7-226ENST00000547259 UBXN4Q92575 508 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms