RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ABCB7O75027 752 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 EGFRP00533 1210 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 PROZP22891 400 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 SLC6A4P31645 630 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 CAPZA2P47755 286 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 OAZ1P54368 228 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 ST8SIA6P61647 398 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 MAB21L1Q13394 359 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 SLC26A9Q7LBE3 791 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 IRF2BPLQ9H1B7 796 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 MED11Q9P086 117 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 BAZ2BQ9UIF8 2168 aaKnown RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 H0YAE9 185 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 POLR2JP52435 117 aaKnown RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 C10orf120Q5SQS8 335 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 ASRGL1Q7L266 308 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 KCNN2Q9H2S1 579 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 PNMA8BQ9ULN7 279 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-212ENST00000546744 COG5Q9UP83 839 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 OR14I1A6ND48 311 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 RFXANKO14593 260 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 AXLP30530 894 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 ERMP1Q7Z2K6 904 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 TRPV3Q8NET8 790 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 MARK4Q96L34 752 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 CPXM1Q96SM3 734 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 PCDHB18PQ96TA0 734 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 TMEM138Q9NPI0 162 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
PTCH1-212ENST00000546744 KCNU1A8MYU2 1149 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 QSOX1O00391 747 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 SERPINB7O75635 380 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 CAPN15O75808 1086 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 ADRB2P07550 413 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 CTSKP43235 329 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 BNIP3Q12983 259 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 PCBP1Q15365 356 aaKnown RBP eCLIP12.77□□□□□ -0.36
PTCH1-212ENST00000546744 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 ERAP2Q6P179 960 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 METTL7BQ6UX53 244 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 STX12Q86Y82 276 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 TSPEARQ8WU66 669 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 ACAT2Q9BWD1 397 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 ZCCHC2Q9C0B9 1178 aaKnown RBP12.77□□□□□ -0.36
PTCH1-212ENST00000546744 SLC39A8Q9C0K1 460 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 MKS1Q9NXB0 559 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 PMF1-BGLAPU3KQ54 211 aa12.77□□□□□ -0.36
PTCH1-212ENST00000546744 CYB561D2O14569 222 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 AXIN1O15169 862 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 CDH1P12830 882 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 GNAZP19086 355 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 CD72P21854 359 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 FBXW4P57775 412 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 RPL7AP62424 266 aaKnown RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 PRKCQQ04759 706 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 MTMR2Q13614 643 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 GLB1LQ6UWU2 654 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF517Q6ZMY9 492 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 LPCAT1Q8NF37 534 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZFP28Q8NHY6 868 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZUFSPQ96AP4 578 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 PORCNQ9H237 461 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 CNTN6Q9UQ52 1028 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 OR6B1O95007 311 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 FYNP06241 537 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 IL1R1P14778 569 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 CREB1P16220 341 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF181Q2M3W8 571 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 RETSATQ6NUM9 610 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 C15orf40Q8WUR7 153 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 PIH1D2Q8WWB5 315 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 FEM1CQ96JP0 617 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF668Q96K58 619 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF512Q96ME7 567 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 OR52E6Q96RD3 313 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 TLR8Q9NR97 1041 aaKnown RBP12.77□□□□□ -0.37
PTCH1-212ENST00000546744 RPS6KB2Q9UBS0 482 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 KLQ9UEF7 1012 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 PCDHGA3Q9Y5H0 932 aa12.77□□□□□ -0.37
PTCH1-212ENST00000546744 LTFP02788 710 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 NOS3P29474 1203 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms