RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 OXNAD1Q96HP4 312 aaPredicted RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 APOLD1Q96LR9 279 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 BOCQ9BWV1 1114 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 LGR4Q9BXB1 951 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 CLPBQ9H078 707 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 EVA1BQ9NVM1 165 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 NFKBIL1Q9UBC1 381 aaPredicted RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 KLK13Q9UKR3 277 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 GUCA1BQ9UMX6 200 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 U3KQA8 63 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 TDRD6O60522 2096 aaKnown RBP11.83□□□□□ -0.51
YBX3-217ENST00000546164 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 YY2O15391 372 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 PMPCBO75439 489 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 TNFP01375 233 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 GP1BAP07359 652 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 ANXA6P08133 673 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 GPR1P46091 355 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 SPINT3P49223 89 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 DUSP3P51452 185 aaPredicted RBP11.83□□□□□ -0.52
YBX3-217ENST00000546164 WNT3AP56704 352 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 MPP3Q13368 585 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 C1orf61Q13536 156 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 PCSK7Q16549 785 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 DEFB133Q30KQ1 61 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 HENMT1Q5T8I9 393 aaKnown RBP11.83□□□□□ -0.52
YBX3-217ENST00000546164 KCTD16Q68DU8 428 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 ITPRIPL1Q6GPH6 555 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 RAET1GQ6H3X3 334 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 CCDC70Q6NSX1 233 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 TMPRSS12Q86WS5 348 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 CACTIN-AS1Q8N1I8 211 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 CCHCR1Q8TD31 782 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 GATA6Q92908 595 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 SCAMP4Q969E2 229 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 EID2BQ96D98 161 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 MRGPRX2Q96LB1 330 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 WDR24Q96S15 920 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 FRMD8Q9BZ67 464 aaPredicted RBP11.83□□□□□ -0.52
YBX3-217ENST00000546164 CDH19Q9H159 772 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 GBA3Q9H227 469 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 ZFYVE1Q9HBF4 777 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 PKD2L2Q9NZM6 624 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 CD84Q9UIB8 345 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 SLC17A4Q9Y2C5 497 aa11.83□□□□□ -0.52
YBX3-217ENST00000546164 PRSS38A1L453 326 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 STK10O94804 968 aaKnown RBP11.82□□□□□ -0.52
YBX3-217ENST00000546164 CEACAM5P06731 702 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 CTSEP14091 401 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 HLA-DPA1P20036 260 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 DCDC1P59894 354 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 DAB2P98082 770 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 E2F1Q01094 437 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 MEI1Q5TIA1 1274 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
YBX3-217ENST00000546164 DHRS13Q6UX07 377 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 CCNI2Q6ZMN8 369 aaPredicted RBP11.82□□□□□ -0.52
YBX3-217ENST00000546164 NYAP1Q6ZVC0 841 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 LYSMD3Q7Z3D4 306 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 TMC3Q7Z5M5 1100 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 KLHDC8BQ8IXV7 354 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 SLC35B2Q8TB61 432 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 SCARF2Q96GP6 870 aaPredicted RBP11.82□□□□□ -0.52
YBX3-217ENST00000546164 COX14Q96I36 57 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 SPATA13Q96N96 652 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 CNTNAP3BQ96NU0 1288 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 PPP1R2P1Q96PQ5 205 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 ALS2CR12Q96Q35 445 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 AGAP2Q99490 1192 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 RIOK2Q9BVS4 552 aaKnown RBP11.82□□□□□ -0.52
YBX3-217ENST00000546164 CNTNAP3Q9BZ76 1288 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 CARD9Q9H257 536 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 TRABDQ9H4I3 376 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 C10orf88Q9H8K7 445 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 RAD18Q9NS91 495 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 UBP1Q9NZI7 540 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 USP24Q9UPU5 2620 aa11.82□□□□□ -0.52
YBX3-217ENST00000546164 EME2A4GXA9 379 aaPredicted RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 C5orf60A6NFR6 353 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 KCNN4O15554 427 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 ANXA9O76027 345 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 PTMAP06454 111 aaKnown RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 IVLP07476 585 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 CELA2BP08218 269 aaPredicted RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 RPIAP49247 311 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 GEMP55040 296 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 RPS6KA1Q15418 735 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 CCDC157Q569K6 752 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 ANKRD20A2Q5SQ80 823 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 ANKRD20A1Q5TYW2 823 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 ANKRD20A3Q5VUR7 823 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 PDPK2PQ6A1A2 396 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms