RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZFYVE1Q9HBF4 777 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 MAGEE1Q9HCI5 957 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 CYP4F12Q9HCS2 524 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 UBP1Q9NZI7 540 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
CCDC78-216ENST00000544996 PRSS38A1L453 326 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 C1QTNF9BB2RNN3 333 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 EPOP01588 193 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 GP1BAP07359 652 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 C1QTNF9P0C862 333 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 RBP3P10745 1247 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 RBL1P28749 1068 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 SPINT3P49223 89 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 TCEA2Q15560 299 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 CDKN3Q16667 212 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 ITPRIPL1Q6GPH6 555 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 AADACL2Q6P093 401 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 RFLNAQ6ZTI6 216 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 TAF8Q7Z7C8 310 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 TTC13Q8NBP0 860 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 HES6Q96HZ4 224 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 HERPUD2Q9BSE4 406 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 RIOK2Q9BVS4 552 aaKnown RBP15.67■□□□□ 0.1
CCDC78-216ENST00000544996 GPR63Q9BZJ6 419 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 ABCG4Q9H172 646 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 FAM83DQ9H4H8 585 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 CARS2Q9HA77 564 aaKnown RBP15.67■□□□□ 0.1
CCDC78-216ENST00000544996 MRPL40Q9NQ50 206 aaKnown RBP15.67■□□□□ 0.1
CCDC78-216ENST00000544996 RAD18Q9NS91 495 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 CAPN6Q9Y6Q1 641 aa15.67■□□□□ 0.1
CCDC78-216ENST00000544996 CPED1A4D0V7 1026 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 FAM149AA5PLN7 773 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 TMEM8BA6NDV4 472 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 DDX3YO15523 660 aaKnown RBP15.66■□□□□ 0.1
CCDC78-216ENST00000544996 PROS1P07225 676 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 CELA2BP08218 269 aaPredicted RBP15.66■□□□□ 0.1
CCDC78-216ENST00000544996 MYF5P13349 255 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 WNT3AP56704 352 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 MPP3Q13368 585 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 NYAP1Q6ZVC0 841 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 NAT6Q93015 286 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 HIC2Q96JB3 615 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 ALS2CR12Q96Q35 445 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 FRMD8Q9BZ67 464 aaPredicted RBP15.66■□□□□ 0.1
CCDC78-216ENST00000544996 CDH19Q9H159 772 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 GRPEL1Q9HAV7 217 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 GULP1Q9UBP9 304 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 GPR34Q9UPC5 381 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 SHOC2Q9UQ13 582 aa15.66■□□□□ 0.1
CCDC78-216ENST00000544996 LY6G6EA0A0G2JKS1 128 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 LOC285095A0A1B0GVY8 99 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 GOLGA6L3A6NEY3 463 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 KCNN4O15554 427 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 ANXA9O76027 345 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 SOD1P00441 154 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 CEACAM5P06731 702 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 PIRTP0C851 137 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 GNPDA1P46926 289 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 PRPSAP1Q14558 356 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 HES3Q5TGS1 186 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 KCTD16Q68DU8 428 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 KDELC1Q6UW63 502 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 EFL1Q7Z2Z2 1120 aaKnown RBP15.65■□□□□ 0.1
CCDC78-216ENST00000544996 ARL10Q8N8L6 244 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 FAM46DQ8NEK8 389 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 IPMKQ8NFU5 416 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 IFI44Q8TCB0 444 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 PPP1R2P1Q96PQ5 205 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 AGAP2Q99490 1192 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 FAM118BQ9BPY3 351 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 FSD1LQ9BXM9 530 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 TMEM168Q9H0V1 697 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 GBA3Q9H227 469 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 SUDS3Q9H7L9 328 aaPredicted RBP15.65■□□□□ 0.1
CCDC78-216ENST00000544996 C10orf88Q9H8K7 445 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 TRNAU1APQ9NX07 287 aaKnown RBP15.65■□□□□ 0.1
CCDC78-216ENST00000544996 SIRPGQ9P1W8 387 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 PADI4Q9UM07 663 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 SLC17A4Q9Y2C5 497 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 ZNF711Q9Y462 761 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 U3KQA8 63 aa15.65■□□□□ 0.1
CCDC78-216ENST00000544996 EME2A4GXA9 379 aaPredicted RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 F5H423 210 aaPredicted RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 OPA1O60313 960 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SLC4A1P02730 911 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 HLA-DPA1P20036 260 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 POLD2P49005 469 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 GEMP55040 296 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 INSM1Q01101 510 aaPredicted RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 ILF3Q12906 894 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 PEX6Q13608 980 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 LRRK1Q38SD2 2015 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SIRPB2Q5JXA9 342 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 ANKRD20A2Q5SQ80 823 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 HENMT1Q5T8I9 393 aaKnown RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SEL1L2Q5TEA6 688 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 ANKRD20A1Q5TYW2 823 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms