RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 CCM2LQ9NUG4 571 aaPredicted RBP5.27□□□□□ -1.57
USP28-213ENST00000544967 MOCS1Q9NZB8 636 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 CD300AQ9UGN4 299 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 ANAPC2Q9UJX6 822 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 EMCNQ9ULC0 261 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 PADI3Q9ULW8 664 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 CORINQ9Y5Q5 1042 aa5.27□□□□□ -1.57
USP28-213ENST00000544967 C16orf96A6NNT2 1141 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 BET1O15155 118 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ASNA1O43681 348 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZNF254O75437 659 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SNX4O95219 450 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 STAMBPO95630 424 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CRYZL1O95825 349 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CSF2RAP15509 400 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ITIH1P19827 911 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GARTP22102 1010 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SERPINB1P30740 379 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CAPGP40121 348 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 THPOP40225 353 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 HADHAP40939 763 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MAN2A2P49641 1150 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 NUDT2P50583 147 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CYP2J2P51589 502 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 YWHAZP63104 245 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 BNIP2Q12982 314 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 BNIP3Q12983 259 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 STX5Q13190 355 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ITGADQ13349 1161 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 PIN1Q13526 163 aaPredicted RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 BBS9Q3SYG4 887 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 PPM1LQ5SGD2 360 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GALNT18Q6P9A2 607 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SYCE2Q6PIF2 218 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 IDO2Q6ZQW0 420 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZBTB49Q6ZSB9 765 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SLC24A5Q71RS6 500 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZER1Q7Z7L7 766 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GALNT4Q8N4A0 578 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 FAM47BQ8NA70 645 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SLC4A11Q8NBS3 891 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MAELQ96JY0 434 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 CASD1Q96PB1 797 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CDRT15Q96T59 188 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CLSTN3Q9BQT9 956 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 TTPALQ9BTX7 342 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 APOL6Q9BWW8 343 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CEP44Q9C0F1 390 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 IL22Q9GZX6 179 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ARMC7Q9H6L4 198 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CYP4F11Q9HBI6 524 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 CNGB3Q9NQW8 809 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 OBP2AQ9NY56 170 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 HSPBP1Q9NZL4 362 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 RAP2CQ9Y3L5 183 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MKI67P46013 3256 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 FAM25AB3EWG3 89 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 FAM25CB3EWG5 89 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 FAM25GB3EWG6 89 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SHOXO15266 292 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZBTB14O43829 449 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 UGT2B11O75310 529 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ENDOD1O94919 500 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GJB5O95377 273 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 HPRP00739 348 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZSCAN5DPP0CG00 497 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 UMPSP11172 480 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 HOXB6P17509 224 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 CYP3A5P20815 502 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MMP8P22894 467 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 TBXAS1P24557 533 aaPredicted RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 CXCR2P25025 360 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ATP6V1E1P36543 226 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MAPK9P45984 424 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ERVK-21P61565 698 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 DAB2P98082 770 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 MS4A2Q01362 244 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 BNC1Q01954 994 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 FCHO2Q0JRZ9 810 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GALEQ14376 348 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GALNT3Q14435 633 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SEMA3AQ14563 771 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SF3B4Q15427 424 aaKnown RBP eCLIP5.26□□□□□ -1.57
USP28-213ENST00000544967 SAMD4BQ5PRF9 694 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 C6orf183Q5T699 404 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 FAM102BQ5T8I3 360 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 TWF2Q6IBS0 349 aaKnown RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 PAOXQ6QHF9 649 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 XKR5Q6UX68 686 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ANKS3Q6ZW76 656 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GRAMD2AQ8IUY3 354 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 TMCO5AQ8N6Q1 288 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SHKBP1Q8TBC3 707 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 ZNF606Q8WXB4 792 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 LENG8Q96PV6 779 aaPredicted RBP5.26□□□□□ -1.57
USP28-213ENST00000544967 TMEM121Q9BTD3 319 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 SARGQ9BW04 601 aa5.26□□□□□ -1.57
USP28-213ENST00000544967 GON7Q9BXV9 100 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms