RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 C10orf82Q8WW14 230 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 ARRDC3Q96B67 414 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 ZNF669Q96BR6 464 aaPredicted RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 DNAJC1Q96KC8 554 aaKnown RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 ZNF641Q96N77 438 aaPredicted RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 SRPK1Q96SB4 655 aaKnown RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 GABRG3Q99928 467 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 HEPHQ9BQS7 1158 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 STN1Q9H668 368 aaKnown RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 ZDHHC6Q9H6R6 413 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 CD320Q9NPF0 282 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 POLR3BQ9NW08 1133 aaPredicted RBP7□□□□□ -1.29
HMGCS2-204ENST00000544913 TXNDC16Q9P2K2 825 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 DKK3Q9UBP4 350 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 LNPEPQ9UIQ6 1025 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 RIMKLBQ9ULI2 386 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 DUSP12Q9UNI6 340 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 SORCS3Q9UPU3 1222 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 STON1Q9Y6Q2 735 aa7□□□□□ -1.29
HMGCS2-204ENST00000544913 EDDM13A0A1B0GTR0 161 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 HEATR9A2RTY3 570 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 BNIP3LO60238 219 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GLRA3O75311 464 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 WFS1O76024 890 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ERVK-10P10266 1014 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GLULP15104 373 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 EZRP15311 586 aaKnown RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 TIMP2P16035 220 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CTPS1P17812 591 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 COL9A1P20849 921 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CCND1P24385 295 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SERPINA4P29622 427 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 HNF1BP35680 557 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ABL2P42684 1182 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CSRP3P50461 194 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ARFIP2P53365 341 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SEMG2Q02383 582 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 BCL2L1Q07817 233 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 MGAT5Q09328 741 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 RALGDSQ12967 914 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ELAVL3Q14576 367 aaKnown RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 NUMA1Q14980 2115 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 TBCCQ15814 346 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 PUS10Q3MIT2 529 aaKnown RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ACCSLQ4AC99 568 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ARSIQ5FYB1 569 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 LRRC73Q5JTD7 316 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 FAM91A1Q658Y4 838 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CASC4Q6P4E1 433 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CRTC1Q6UUV9 634 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GDPD4Q6W3E5 623 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 RFLNAQ6ZTI6 216 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 TBC1D1Q86TI0 1168 aaPredicted RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 LCA5Q86VQ0 697 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 BRSK1Q8TDC3 778 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 BLOC1S5Q8TDH9 187 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CSGALNACT1Q8TDX6 532 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 FAM131CQ96AQ9 280 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 IFT43Q96FT9 208 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CERS2Q96G23 380 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SERAC1Q96JX3 654 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 FAM111AQ96PZ2 611 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 AGAP2Q99490 1192 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CPNE1Q99829 537 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 LRMDAQ9H2I8 198 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 C8orf33Q9H7E9 229 aaPredicted RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 MAGEE1Q9HCI5 957 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 KCNK4Q9NYG8 393 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 IL17CQ9P0M4 197 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 MARCH4Q9P2E8 410 aaPredicted RBP6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ZFP69BQ9UJL9 534 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ZNF711Q9Y462 761 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 OR51F1A6NGY5 319 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 C10orf142B7Z368 130 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 PLK4O00444 970 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 AREL1O15033 823 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GPR39O43194 453 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CCDC22O60826 627 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 RFPL1O75677 317 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 ATP6V1G2O95670 118 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 PRSS56P0CW18 603 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 CD72P21854 359 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 PTPN4P29074 926 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 DRD3P35462 400 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 HMGCLP35914 325 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 WASP42768 502 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 POLD2P49005 469 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 COPAP53621 1224 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SEC13P55735 322 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 XIAPP98170 497 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SEPT6Q14141 434 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 GAS6Q14393 721 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 SEMA3AQ14563 771 aa6.99□□□□□ -1.29
HMGCS2-204ENST00000544913 KRT72Q14CN4 511 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms