RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 DUX1O43812 170 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 EXOC3O60645 756 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 EIF5BO60841 1220 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RASGRP1O95267 797 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 VNN1O95497 513 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ASS1P00966 412 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 APOEP02649 317 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ZGLP1P0C6A0 271 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CCL4P13236 92 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ADRB3P13945 408 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 PDGFRAP16234 1089 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 HTR1BP28222 390 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 OAS2P29728 719 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SSTR4P31391 388 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CHRNA3P32297 505 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CSTF2P33240 577 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 IGFALSP35858 605 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TSPAN7P41732 249 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 PIK3CAP42336 1068 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 KIR2DL2P43627 348 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 PEX5P50542 639 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CYP2J2P51589 502 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 NEK4P51957 841 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 HK3P52790 923 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 PER3P56645 1201 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RPS24P62847 133 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 KRT83P78385 493 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 AMPD3Q01432 767 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 GUCY1A3Q02108 690 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 MTA1Q13330 715 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 C1orf61Q13536 156 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 LAPTM5Q13571 262 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ZNF460Q14592 562 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 C16orf72Q14CZ0 275 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 DLG2Q15700 870 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 EDRF1Q3B7T1 1238 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ZACNQ401N2 412 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ZRANB3Q5FWF4 1079 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RALGPS1Q5JS13 557 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RABGAP1LQ5R372 815 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ARHGAP17Q68EM7 881 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CNNM4Q6P4Q7 775 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CCDC73Q6ZRK6 1079 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RD3Q7Z3Z2 195 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 KDELC2Q7Z4H8 507 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SPRED1Q7Z699 444 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CHSY1Q86X52 802 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 HPS6Q86YV9 775 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TP53INP2Q8IXH6 220 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 C12orf56Q8IXR9 622 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CFAP52Q8N1V2 620 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SH2D3CQ8N5H7 860 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 Q8N9G6 341 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ANKRD52Q8NB46 1076 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 GPR156Q8NFN8 814 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 GOLGA5Q8TBA6 731 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 KIAA1524Q8TCG1 905 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 PARD3BQ8TEW8 1205 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CHAC2Q8WUX2 184 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 IRGQQ8WZA9 623 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 RAB7BQ96AH8 199 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 FAXDC2Q96IV6 333 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ZSCAN31Q96LW9 406 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ALPK1Q96QP1 1244 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TWNKQ96RR1 684 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 DPYSL5Q9BPU6 564 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 TRIM62Q9BVG3 475 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CLPBQ9H078 707 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 CAAP1Q9H8G2 361 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SLC39A1Q9NY26 324 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 LRIT1Q9P2V4 623 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 HESX1Q9UBX0 185 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 IL36AQ9UHA7 158 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 SLC12A6Q9UHW9 1150 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 ERRFI1Q9UJM3 462 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 LIMCH1Q9UPQ0 1083 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 POLHQ9Y253 713 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 B3GALT1Q9Y5Z6 326 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 OAS3Q9Y6K5 1087 aaKnown RBP4.13□□□□□ -1.75
SNHG1-220ENST00000544550 MYOFQ9NZM1 2061 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 KNTC1P50748 2209 aa4.13□□□□□ -1.75
SNHG1-220ENST00000544550 AHCTF1Q8WYP5 2266 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 MYO18AQ92614 2054 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 LRRIQ3A6PVS8 624 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 YJEFN3A6XGL0 299 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 E7ENQ6 273 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NEMP1O14524 444 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 IKBKBO14920 756 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CLIC2O15247 247 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 RAD51BO15315 384 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NPHS1O60500 1241 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SORBS2O94875 1100 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CTSLP07711 333 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SETSIPP0DME0 302 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 FGF3P11487 239 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PRF1P14222 555 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CD58P19256 250 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NR1D1P20393 614 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 TACR2P21452 398 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms