RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ERN2Q76MJ5 926 aaKnown RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 TTC7BQ86TV6 843 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 SFTPA1Q8IWL2 248 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 IQCKQ8N0W5 287 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 MPP5Q8N3R9 675 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 RIBC1Q8N443 379 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 ZNF366Q8N895 744 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 TXNDC5Q8NBS9 432 aaKnown RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 EZH1Q92800 747 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 TCEAL3Q969E4 200 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 NSMCE3Q96MG7 304 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 FAM129BQ96TA1 746 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 ACOX2Q99424 681 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 CDH19Q9H159 772 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 PIH1D1Q9NWS0 290 aaKnown RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 HCN2Q9UL51 889 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 PLAAQ9Y263 795 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 ZNF711Q9Y462 761 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 C1orf232A0A0U1RR37 186 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 EXOC1LA0A1B0GW35 172 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TCRBV9S1A1TA0A576 114 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 PSMD11O00231 422 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 LDB2O43679 373 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 AP1G1O43747 822 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 BANF1O75531 89 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 DNTTP04053 509 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 CTSLP07711 333 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 C7P10643 843 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 SSTR1P30872 391 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 SLC8A1P32418 973 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 HNF1BP35680 557 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 HMGCLP35914 325 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 PPARGP37231 505 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 ABL2P42684 1182 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 WASP42768 502 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 PSMD8P48556 350 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 DGKEP52429 567 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 GPX6P59796 221 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 ACVR1Q04771 509 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 MSLNQ13421 630 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 MTM1Q13496 603 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 THOC5Q13769 683 aaKnown RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 RASA2Q15283 850 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 UAP1Q16222 522 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 LGSNQ5TDP6 509 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TAOK1Q7L7X3 1001 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 LRRC6Q86X45 466 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 MMAAQ8IVH4 418 aaKnown RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 IGDCC3Q8IVU1 814 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 CBARPQ8N350 705 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 RPLP0P6Q8NHW5 317 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.51□□□□□ -0.89
YBX3-215ENST00000544504 CERS2Q96G23 380 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TTC1Q99614 292 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 FAM167BQ9BTA0 163 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 MTG2Q9H4K7 406 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 CHRAC1Q9NRG0 131 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TREX1Q9NSU2 369 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 NLE1Q9NVX2 485 aaPredicted RBP9.51□□□□□ -0.89
YBX3-215ENST00000544504 MOCS1Q9NZB8 636 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 PKD2L2Q9NZM6 624 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 SLC24A2Q9UI40 661 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 APPL1Q9UKG1 709 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 NCKAP1Q9Y2A7 1128 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 MSRB2Q9Y3D2 182 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 CKAP5Q14008 2032 aa9.51□□□□□ -0.89
YBX3-215ENST00000544504 KALRNO60229 2985 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 RALGAPA1Q6GYQ0 2036 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 MAST4O15021 2626 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 LNP1A1A4G5 178 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 FAM159BA6NKW6 160 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 H7C0S8 307 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 NEMP1O14524 444 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 MAP2K7O14733 419 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 RASGRF2O14827 1237 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 TSPAN6O43657 245 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 CDH16O75309 829 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 INHBAP08476 426 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 ACADMP11310 421 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 ADRB3P13945 408 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 TIMP2P16035 220 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 CTPS1P17812 591 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 CNTFP26441 200 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 NMBRP28336 390 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 ATP5DP30049 168 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 MMP12P39900 470 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 MSH2P43246 934 aa9.5□□□□□ -0.89
YBX3-215ENST00000544504 PXNP49023 591 aaPredicted RBP9.5□□□□□ -0.89
YBX3-215ENST00000544504 SERPINB9P50453 376 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms