RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 ZDHHC13Q8IUH4 622 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 GPR21Q99679 349 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 RERGLQ9H628 205 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 SMOXQ9NWM0 555 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 TSC22D4Q9Y3Q8 395 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 A0A0J9YVX5 310 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 MATN3O15232 486 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 AGTR2P50052 363 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 APLP1P51693 650 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 DAB2P98082 770 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 GLYATQ6IB77 296 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 LGI2Q8N0V4 545 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 KLHL25Q9H0H3 589 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 F8W810 466 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 ARPC2O15144 300 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 DENRO43583 198 aaKnown RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 VPS26AO75436 327 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 OR4F21O95013 312 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 COL6A2P12110 1019 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 ELK4P28324 431 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 GPR15P49685 360 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 IST1P53990 364 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 CDKN2DP55273 166 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 SPIDRQ14159 915 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 KLHL35Q6PF15 583 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 ABCC13Q9NSE7 274 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 EIF2B4Q9UI10 523 aaKnown RBP13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 USP22Q9UPT9 525 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 MCM3APO60318 1980 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
PCMTD1-208ENST00000544451 IQCF5A8MTL0 148 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 LRATO95237 230 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 RPS9P46781 194 aaKnown RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 INHBEP58166 350 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 UFM1P61960 85 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 RPL38P63173 70 aaKnown RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CREB5Q02930 508 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 KIAA1841Q6NSI8 718 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 SMIM14Q96QK8 99 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 KIFC1Q9BW19 673 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CHID1Q9BWS9 393 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 ACTL7AQ9Y615 435 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CDC7O00311 574 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 NPHS1O60500 1241 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 HAPLN1P10915 354 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 IL7RP16871 459 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 EFNA1P20827 205 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 UGT1A1P22309 533 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 UGT1A4P22310 534 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 OXTRP30559 389 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 UGT1A3P35503 534 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 UGT1A5P35504 534 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CLCQ05315 142 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 GPR162Q16538 588 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 TAF2Q6P1X5 1199 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 STAG3L4Q8TBR4 150 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 MAGED1Q9Y5V3 778 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 NT5C1B-RDH14C9J2C7 533 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 KPNA6O60684 536 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 DEAF1O75398 565 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 SLC22A3O75751 556 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 SNAI1O95863 264 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CTPS1P17812 591 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 PRKACGP22612 351 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CCNCP24863 283 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 SIM2Q14190 667 aaPredicted RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 MYBPC3Q14896 1274 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CCL14Q16627 93 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 LINGO4Q6UY18 593 aa13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 CPSF7Q8N684 471 aaKnown RBP13.19□□□□□ -0.3
PCMTD1-208ENST00000544451 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms