RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 OR4A15Q8NGL6 344 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 HM13Q8TCT9 377 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 PPCDCQ96CD2 204 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 URADA6NGE7 173 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 PAGE1O75459 146 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 RAET1GQ6H3X3 334 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 LLGL2Q6P1M3 1020 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 NAT14Q8WUY8 206 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 OSBPL7Q9BZF2 842 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RHBGQ9H310 441 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 FAM124BQ9H5Z6 455 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 TMEM138Q9NPI0 162 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 BTN3A3O00478 584 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 PTGIRP43119 386 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 HEXDCQ8WVB3 486 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 SDCBP2Q9H190 292 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 C5orf60A6NFR6 353 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 AREL1O15033 823 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 MDM4O15151 490 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 ZW10O43264 779 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 AP2A1O95782 977 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 GPIP06744 558 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 ABRQ12979 859 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 GSAPA4D1B5 854 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 PGRMC2O15173 223 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RGS10O43665 173 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 HTR7P34969 479 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RALGDSQ12967 914 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 CPTPQ5TA50 214 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 DEF8Q6ZN54 512 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 RNASE11Q8TAA1 199 aaKnown RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
TNC-212ENST00000542877 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
TNC-212ENST00000542877 DPPA5A6NC42 116 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 GCATO75600 419 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 PKMP14618 531 aaKnown RBP13.08□□□□□ -0.31
TNC-212ENST00000542877 RPL4P36578 427 aaKnown RBP13.08□□□□□ -0.31
TNC-212ENST00000542877 CTSKP43235 329 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 TATDN1Q6P1N9 297 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 FAM92BQ6ZTR7 304 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 PIGWQ7Z7B1 504 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 CERS5Q8N5B7 392 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 SPOCK2Q92563 424 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 NXNL1Q96CM4 212 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.31
TNC-212ENST00000542877 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.31
TNC-212ENST00000542877 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 TMA7Q9Y2S6 64 aaKnown RBP13.08□□□□□ -0.31
TNC-212ENST00000542877 SH3GLB1Q9Y371 365 aa13.08□□□□□ -0.31
TNC-212ENST00000542877 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 DRICH1Q6PGQ1 229 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 ZBTB46Q86UZ6 589 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 HPS1Q92902 700 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 GBA3Q9H227 469 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 FETUBQ9UGM5 382 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 PPLO60437 1756 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 COL1A2P08123 1366 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 MFSD11O43934 449 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 THRBP10828 461 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 IGFBP5P24593 272 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 GALK1P51570 392 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 CREMQ03060 361 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 EXOC2Q96KP1 924 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 KCNU1A8MYU2 1149 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 BCKDKO14874 412 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 PLIN3O60664 434 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 CTPS1P17812 591 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms