RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 TFCP2L1Q9NZI6 479 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 AGTPBP1Q9UPW5 1226 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF148Q9UQR1 794 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TNFSF13BQ9Y275 285 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 LIPGQ9Y5X9 500 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 FAM135BQ49AJ0 1406 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SAMD9Q5K651 1589 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ARHGAP5Q13017 1502 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 MED14O60244 1454 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 LRRC9Q6ZRR7 1453 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 EMSYQ7Z589 1322 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 POLR1AO95602 1720 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 FAM157AC9JC47 383 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 CCDC188H7C350 402 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 OVOL3O00110 214 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 EBAG9O00559 213 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 MPPED1O15442 326 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SIX3O95343 332 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TRUB2O95900 331 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 PNPP00491 289 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SRCP12931 536 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 AKR1A1P14550 325 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TCEA1P23193 301 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 YWHAQP27348 245 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 EPHB2P29323 1055 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 HSPA4P34932 840 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 MRPS35P82673 323 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 GUCY1B3Q02153 619 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SLC18A2Q05940 514 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ITGA7Q13683 1181 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 RCN2Q14257 317 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 KPNB1Q14974 876 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 DLG2Q15700 870 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TCTN1Q2MV58 587 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 USP41Q3LFD5 358 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 PLK5Q496M5 336 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKRD20A4Q4UJ75 823 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKRD20A8PQ5CZ79 823 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKRD20A2Q5SQ80 823 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 C6orf141Q5SZD1 244 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 RARS2Q5T160 578 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 LRIF1Q5T3J3 769 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 C6orf163Q5TEZ5 329 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKRD20A1Q5TYW2 823 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKRD20A3Q5VUR7 823 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM198Q66K66 360 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF772Q68DY9 489 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM65Q6PI78 240 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 QSOX2Q6ZRP7 698 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA19Q7Z5L4 167 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 BCDIN3DQ7Z5W3 292 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 CENPVQ7Z7K6 275 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SLC9B2Q86UD5 537 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 HOOK3Q86VS8 718 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 LURAP1LQ8IV03 231 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ARID3BQ8IVW6 561 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 MCEMP1Q8IX19 187 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 CADM3Q8N126 398 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 AFAP1Q8N556 730 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ATAD1Q8NBU5 361 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 CFAP61Q8NHU2 1237 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ZC3HAV1LQ96H79 300 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF830Q96NB3 372 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 DACH2Q96NX9 599 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM237Q96Q45 408 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 INTS14Q96SY0 518 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 NUAK2Q9H093 628 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 MMP27Q9H306 513 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 GOLPH3LQ9H4A5 285 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 BPIFA1Q9NP55 256 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 SERTAD4Q9NUC0 356 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 OLAHQ9NV23 265 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 ARL8BQ9NVJ2 186 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 HPF1Q9NWY4 346 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 CWC15Q9P013 229 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 AKAP7Q9P0M2 348 aaPredicted RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 DKK2Q9UBU2 259 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 KCNK7Q9Y2U2 307 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 WBP11Q9Y2W2 641 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 LSM4Q9Y4Z0 139 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 JCADQ9P266 1359 aa3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 DNMT1P26358 1616 aaKnown RBP3.99□□□□□ -1.77
SFSWAP-211ENST00000542813 EEA1Q15075 1411 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 A0A1W2PRV1 198 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TYW5A2RUC4 315 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM200CA6NKL6 621 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ANXA2P2A6NMY6 339 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HSPB2A8KAH6 182 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 MAGEB17A8MXT2 336 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PGRMC2O15173 223 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 MSI1O43347 362 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PPFIA2O75334 1257 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 DAB1O75553 588 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 IGHDP01880 384 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CD63P08962 238 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms