RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 TNFRSF8P28908 595 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 STIP1P31948 543 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CCT6AP40227 531 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 HDAC4P56524 1084 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 MRPS25P82663 173 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SULT2A1Q06520 285 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CBX3Q13185 183 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 BTG3Q14201 252 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 KARSQ15046 597 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 PPP1R7Q15435 360 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 TAF11Q15544 211 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SLC18A3Q16572 532 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 TMEM268Q5VZI3 342 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 TBC1D9BQ66K14 1250 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NCCRP1Q6ZVX7 275 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 OTUD6AQ7L8S5 288 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 TMEM110Q86TL2 294 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 WDR5BQ86VZ2 330 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NAXEQ8NCW5 288 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 ENGASEQ8NFI3 743 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CCDC51Q96ER9 411 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 ZNF419Q96HQ0 510 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NAF1Q96HR8 494 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 GDAP1L1Q96MZ0 367 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NDNQ99608 321 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 EIF2AK1Q9BQI3 630 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 FUZQ9BT04 418 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SPRTNQ9H040 489 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 MIS12Q9H081 205 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NDST4Q9H3R1 872 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 EPHX3Q9H6B9 360 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 TASP1Q9H6P5 420 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SEMA4BQ9NPR2 832 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CNOT7Q9UIV1 285 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SH3GLB1Q9Y371 365 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CYP46A1Q9Y6A2 500 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 SETD1AO15047 1707 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 ADCY9O60503 1353 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CEMIPQ8WUJ3 1361 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 KIAA0232Q92628 1395 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CPSF1Q10570 1443 aaKnown RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 NPATQ14207 1427 aa4.62□□□□□ -1.67
C2CD3-218ENST00000542484 CDK12Q9NYV4 1490 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-218ENST00000542484 A0A1W2PPC1 479 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CCDC162PA2VCL2 907 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CCT8L1PA6NM43 557 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 AKR1B15C9JRZ8 316 aaPredicted RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 PPEF2O14830 753 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 PER2O15055 1255 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 WDR46O15213 610 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CLTAP09496 248 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CHRNB1P11230 501 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 UNGP13051 313 aaPredicted RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 NR1D1P20393 614 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ATP6V1C1P21283 382 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 PSMA5P28066 241 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 LIFRP42702 1097 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 PTPN9P43378 593 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CLCNKBP51801 687 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 MYL5Q02045 173 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 KLC1Q07866 573 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ITIH4Q14624 930 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 BAK1Q16611 211 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 SYTL3Q4VX76 610 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 TTMPQ5BVD1 217 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ANKRD20A2Q5SQ80 823 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CFAP58Q5T655 872 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ANKRD20A1Q5TYW2 823 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 GKAP1Q5VSY0 366 aaPredicted RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ANKRD20A3Q5VUR7 823 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 SPECC1LQ69YQ0 1117 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 IRGCQ6NXR0 463 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 OLFM4Q6UX06 510 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 TRAPPC11Q7Z392 1133 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ADGRG6Q86SQ4 1221 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ERICH1Q86X53 443 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 SLC35F6Q8N357 371 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 MMGT1Q8N4V1 131 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 DPP10Q8N608 796 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ARL10Q8N8L6 244 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CNBD1Q8NA66 436 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 NOA1Q8NC60 698 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 STKLD1Q8NE28 680 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 AGAP11Q8TF27 550 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 RUFY2Q8WXA3 655 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 IRGQQ8WZA9 623 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 MRPS27Q92552 414 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 CNOT9Q92600 299 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ELP4Q96EB1 424 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 PPM1MQ96MI6 270 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ZNF778Q96MU6 729 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 SDF4Q9BRK5 362 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 MAK16Q9BXY0 300 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 RABEP2Q9H5N1 569 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 MRPL44Q9H9J2 332 aaKnown RBP4.61□□□□□ -1.67
C2CD3-218ENST00000542484 UBN1Q9NPG3 1134 aa4.61□□□□□ -1.67
C2CD3-218ENST00000542484 ATP8A2Q9NTI2 1148 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms