RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CLSTN2Q9H4D0 955 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 TRPC7Q9HCX4 862 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 DMAP1Q9NPF5 467 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-220ENST00000541963 TBC1D23Q9NUY8 699 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 MYO1AQ9UBC5 1043 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 HESX1Q9UBX0 185 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 KIAA1257Q9ULG3 409 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 COQ4Q9Y3A0 265 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 PCDHGB2Q9Y5G2 931 aa5.6□□□□□ -1.51
CPSF7-220ENST00000541963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.6□□□□□ -1.51
CPSF7-220ENST00000541963 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 A0A1W2PPC4 97 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ZNF840PA6NDX5 716 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 E7ENX8 843 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 E9PLN8 166 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 K7ESM1 405 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CLDN5O00501 218 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TOR1BO14657 336 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SLC9A3R1O14745 358 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 AREL1O15033 823 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PI15O43692 258 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 AFPP02771 609 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ITGALP20701 1170 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 FDXRP22570 491 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 MSNP26038 577 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ADORA2BP29275 332 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PLA2G5P39877 138 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 IFNAR2P48551 515 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 FMO5P49326 533 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 VCPP55072 806 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 MAP3K7CLP57077 242 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 HSD11B2P80365 405 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TAP2Q03519 686 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 GOLGA8FQ08AF8 430 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 GOLGA8DPQ0D2H9 430 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TCF15Q12870 199 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TAF10Q12962 218 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CUL2Q13617 745 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PMS2P11Q13670 270 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 RUNX3Q13761 415 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PDGFRLQ15198 375 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ITPRIPL2Q3MIP1 535 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CBWD6Q4V339 395 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CBWD3Q5JTY5 395 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CBWD5Q5RIA9 395 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 HECTD3Q5T447 861 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 STXBP5Q5T5C0 1151 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 C1QL3Q5VWW1 255 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 FBXO38Q6PIJ6 1188 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TPRG1Q6ZUI0 275 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TMEM150AQ86TG1 271 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ZSCAN30Q86W11 494 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 RALGPS2Q86X27 583 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CCDC105Q8IYK2 499 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 RNF152Q8N8N0 203 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ARL14EPQ8N8R7 260 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TMEM105Q8N8V8 129 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ZNF527Q8NB42 609 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 PSD4Q8NDX1 1056 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CCDC26Q8TAB7 109 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SLC2A14Q8TDB8 520 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SEMA4DQ92854 862 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 ATOH1Q92858 354 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 FBXO32Q969P5 355 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SLC35C1Q96A29 364 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TMEM41AQ96HV5 264 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 RBM15Q96T37 977 aaKnown RBP eCLIP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 KCNK16Q96T55 309 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 VKORC1Q9BQB6 163 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CRB3Q9BUF7 120 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 DDX23Q9BUQ8 820 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TTLL2Q9BWV7 592 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SSBP3Q9BWW4 388 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 DUSP16Q9BY84 665 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 MAGEB5Q9BZ81 275 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 UBXN6Q9BZV1 441 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 NACA2Q9H009 215 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 SDCBP2Q9H190 292 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 APOBEC3GQ9HC16 384 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CSNK1G1Q9HCP0 422 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 LTB4R2Q9NPC1 389 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TLR8Q9NR97 1041 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 HEBP1Q9NRV9 189 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 GKN1Q9NS71 199 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CISHQ9NSE2 258 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 DUS2Q9NX74 493 aaKnown RBP5.59□□□□□ -1.51
CPSF7-220ENST00000541963 CDC23Q9UJX2 597 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 NME7Q9Y5B8 376 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 NCOR1O75376 2440 aa5.59□□□□□ -1.51
CPSF7-220ENST00000541963 TECTAO75443 2155 aa5.59□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF638Q14966 1978 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MUC3AQ02505 3323 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 NCANO14594 1321 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms