RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ITGB2P05107 769 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 LIPCP11150 499 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 ADRB3P13945 408 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CTSEP14091 401 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CCNB1P14635 433 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PECAM1P16284 738 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 ITGB6P18564 788 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 UGT1A5P35504 534 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CCNHP51946 323 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 MAPK10P53779 464 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CCL7P80098 99 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 IFI35P80217 286 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 SLC10A7Q0GE19 358 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PTK2BQ14289 1009 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 ZNF235Q14590 738 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PRKD1Q15139 912 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 NOMO1Q15155 1222 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 LLGL1Q15334 1064 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 MYLK3Q32MK0 819 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 RALGPS1Q5JS13 557 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CCDC181Q5TID7 509 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 ALG1LQ6GMV1 187 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 SLC13A5Q86YT5 568 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PHACTR4Q8IZ21 702 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 SDR16C5Q8N3Y7 309 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 TFB1MQ8WVM0 346 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CCDC74AQ96AQ1 378 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 LIN37Q96GY3 246 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PBKQ96KB5 322 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 GFM1Q96RP9 751 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 MGME1Q9BQP7 344 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 BOCQ9BWV1 1114 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 HDAC8Q9BY41 377 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 FRMD8P1Q9BZ68 369 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CPEB1Q9BZB8 566 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 SLC13A1Q9BZW2 595 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 TM6SF2Q9BZW4 377 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 ZDHHC6Q9H6R6 413 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 SAE1Q9UBE0 346 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 HECAQ9UBI9 543 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 FADS3Q9Y5Q0 445 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
CLSTN3-212ENST00000541770 CES2O00748 559 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 YY2O15391 372 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RPLP0P05388 317 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 CELA2BP08218 269 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 TSHRP16473 764 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ITIH1P19827 911 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 CR2P20023 1033 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 CES1P23141 567 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 MMP13P45452 471 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RGRP47804 291 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 GNG11P61952 73 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 AP1S1P61966 158 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 OTUD4Q01804 1114 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 AP1B1Q10567 949 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 EIF3IQ13347 325 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 TBR1Q16650 682 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ATXN7L2Q5T6C5 722 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 PARS2Q7L3T8 475 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RD3Q7Z3Z2 195 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ZFAND4Q86XD8 727 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 PGBD5Q8N414 524 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RASGEF1CQ8N431 466 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ACTL9Q8TC94 416 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 HCAR2Q8TDS4 363 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 MAIP1Q8WWC4 291 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 JPH3Q8WXH2 748 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 VOPP1Q96AW1 172 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 HAUS1Q96CS2 278 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 TRIM44Q96DX7 344 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 NUDCD1Q96RS6 583 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 TUBGCP5Q96RT8 1024 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 VAT1Q99536 393 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 LRRC61Q9BV99 259 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 OSBPL1AQ9BXW6 950 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 CLPBQ9H078 707 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 SLC25A18Q9H1K4 315 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 GPR27Q9NS67 375 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 GGT7Q9UJ14 662 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 TTC7AQ9ULT0 858 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ITM2BQ9Y287 266 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 ATP8A1Q9Y2Q0 1164 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 LOXL2Q9Y4K0 774 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 PCDHGA7Q9Y5G6 932 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 MAST4O15021 2626 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 NAV2Q8IVL1 2488 aa8.72□□□□□ -1.01
CLSTN3-212ENST00000541770 PRAMEF33A0A0G2JMD5 474 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 D6RAR5 112 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LMO7DNF2Z398 122 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 TMX2-CTNND1H3BSU7 103 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms