RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 EMP3P54852 163 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 PSME3P61289 254 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 GRIK2Q13002 908 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 LSM12Q3MHD2 195 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 C9orf57Q5W0N0 161 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 TRMT10BQ6PF06 316 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 TSSK4Q6SA08 328 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CD300LGQ6UXG3 332 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 NPNTQ6UXI9 565 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CCDC80Q76M96 950 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 EFL1Q7Z2Z2 1120 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 STRA8Q7Z7C7 330 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 GPR180Q86V85 440 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 DHFR2Q86XF0 187 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 AADATQ8N5Z0 425 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 METTL25Q8N6Q8 603 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 ZNF781Q8N8C0 355 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CALML6Q8TD86 181 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 HPDLQ96IR7 371 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 FEM1CQ96JP0 617 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CCDC138Q96M89 665 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 RDH12Q96NR8 316 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 GPR22Q99680 433 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 RHOJQ9H4E5 214 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CAAP1Q9H8G2 361 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 SPATA6Q9NWH7 488 aaPredicted RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 RHBDL2Q9NX52 303 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 ADA2Q9NZK5 511 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 FBXW11Q9UKB1 542 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 CROTQ9UKG9 612 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 AAR2Q9Y312 384 aaKnown RBP10.41□□□□□ -0.74
CHFR-219ENST00000541341 COL4A2P08572 1712 aa10.41□□□□□ -0.74
CHFR-219ENST00000541341 ATG2BQ96BY7 2078 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 ZNF839A8K0R7 811 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 ANHXE9PGG2 379 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 G3V2L1 256 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 H0YAE9 185 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 H3BSA7 217 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 VAPBO95292 243 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 METTL18O95568 372 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 AP2A1O95782 977 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 SNRPB2P08579 225 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 OCM2P0CE71 109 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 OCMP0CE72 109 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 PCSK2P16519 638 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 DCKP27707 260 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 HTR7P34969 479 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 OR1D2P34982 312 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 BCAT1P54687 386 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 SLC12A2P55011 1212 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 INHBCP55103 352 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 ARPP19P56211 112 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 OCA2Q04671 838 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 MTA1Q13330 715 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 TOP3AQ13472 1001 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 PAFAH1B3Q15102 231 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 CYTH1Q15438 398 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 PPP6R3Q5H9R7 873 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 NXNQ6DKJ4 435 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 C16orf87Q6PH81 154 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 RSPO2Q6UXX9 243 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 PRR23CQ6ZRP0 262 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 KIAA0408Q6ZU52 694 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 FAM183BPQ6ZVS7 135 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 LIMS2Q7Z4I7 341 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 C1orf210Q8IVY1 113 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 TMEM130Q8N3G9 435 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 PHTF2Q8N3S3 785 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 PJA1Q8NG27 643 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 OR2T34Q8NGX1 318 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 OR2T3Q8NH03 318 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 RAB2BQ8WUD1 216 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 STYXQ8WUJ0 223 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 TFAP2CQ92754 450 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 FGF13Q92913 245 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 PPWD1Q96BP3 646 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 RCN3Q96D15 328 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 FAM84AQ96KN4 292 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 ZNF560Q96MR9 790 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 PEBP4Q96S96 227 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 PKP2Q99959 881 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 TTPALQ9BTX7 342 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 TRIM62Q9BVG3 475 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 GATA5Q9BWX5 397 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 PLA2G2FQ9BZM2 168 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 MRPL46Q9H2W6 279 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 TASP1Q9H6P5 420 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHFR-219ENST00000541341 C20orf96Q9NUD7 363 aaPredicted RBP10.4□□□□□ -0.74
CHFR-219ENST00000541341 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHFR-219ENST00000541341 FNIP2Q9P278 1114 aa10.4□□□□□ -0.74
CHFR-219ENST00000541341 VANGL2Q9ULK5 521 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms