RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 DAB2P98082 770 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 CDK18Q07002 472 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 KIF5AQ12840 1032 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 GALNT3Q14435 633 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 HENMT1Q5T8I9 393 aaKnown RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 HES3Q5TGS1 186 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 AADACL2Q6P093 401 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 GUSBP11Q6P575 273 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 ZC3H18Q86VM9 953 aaKnown RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 ZNF567Q8N184 647 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 PTCD2Q8WV60 388 aaKnown RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 HTR3CQ8WXA8 447 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 HAUS1Q96CS2 278 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 AP2M1Q96CW1 435 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 AGAP2Q99490 1192 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 VAT1Q99536 393 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 MLPHQ9BV36 600 aaPredicted RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 ADGRE3Q9BY15 652 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 PHPT1Q9NRX4 125 aaPredicted RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 CNOT6Q9ULM6 557 aaKnown RBP14.15□□□□□ -0.14
USP28-209ENST00000540925 ST14Q9Y5Y6 855 aa14.15□□□□□ -0.14
USP28-209ENST00000540925 MYLKQ15746 1914 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 C1orf232A0A0U1RR37 186 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 LOC285095A0A1B0GVY8 99 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 TAF4O00268 1085 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 OPA1O60313 960 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 TNFP01375 233 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 ANXA6P08133 673 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 NFKB1P19838 968 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 DUSP3P51452 185 aaPredicted RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 GSDMDP57764 484 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 OTUD4Q01804 1114 aaKnown RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 KLF1Q13351 362 aaPredicted RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 NR0B2Q15466 257 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 RAET1GQ6H3X3 334 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 OGFOD3Q6PK18 319 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 LYSMD3Q7Z3D4 306 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 TXLNBQ8N3L3 684 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 ACTL9Q8TC94 416 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 IFI44Q8TCB0 444 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 GPBAR1Q8TDU6 330 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 OXNAD1Q96HP4 312 aaPredicted RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 FCRL5Q96RD9 977 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 TMEM168Q9H0V1 697 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 MAGEE1Q9HCI5 957 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
USP28-209ENST00000540925 CD84Q9UIB8 345 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 CAPN6Q9Y6Q1 641 aa14.14□□□□□ -0.15
USP28-209ENST00000540925 MIF4GDA9UHW6 222 aaKnown RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 NDST3O95803 873 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 EPOP01588 193 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 PYGLP06737 847 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 IVLP07476 585 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 CTSEP14091 401 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 RBL1P28749 1068 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 GPR1P46091 355 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 TARDBPQ13148 414 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP28-209ENST00000540925 PERM1Q5SV97 790 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 RD3Q7Z3Z2 195 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 TMC3Q7Z5M5 1100 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 GKN2Q86XP6 184 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 NRROSQ86YC3 692 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 SYCE1Q8N0S2 351 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 ARL10Q8N8L6 244 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 KYQ8NBH2 561 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 GPR156Q8NFN8 814 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 CCL4L1Q8NHW4 92 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 MRGPRX2Q96LB1 330 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 RIOK2Q9BVS4 552 aaKnown RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 TRNAU1APQ9NX07 287 aaKnown RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 TRHDEQ9UKU6 1024 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 ZMIZ1Q9ULJ6 1067 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
USP28-209ENST00000540925 SPO11Q9Y5K1 396 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 ITPR1Q14643 2758 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 SCN8AQ9UQD0 1980 aa14.13□□□□□ -0.15
USP28-209ENST00000540925 RP1P56715 2156 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 APC2O95996 2303 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 TRABD2BA6NFA1 517 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 FADS2P1A8MWK0 482 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 ARHGAP6O43182 974 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 NOBOXO60393 691 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 PMPCBO75439 489 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 FTCDO95954 541 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 POLD2P49005 469 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 WNT3AP56704 352 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 DCDC1P59894 354 aa14.12□□□□□ -0.15
USP28-209ENST00000540925 PCSK7Q16549 785 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms