RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 KCTD16Q68DU8 428 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 PDZD3Q86UT5 571 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 KYQ8NBH2 561 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 EXD1Q8NHP7 514 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 GRAMD1AQ96CP6 724 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 IMP4Q96G21 291 aaKnown RBP17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 SMIM14Q96QK8 99 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 CCDC3Q9BQI4 270 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 GSDMCQ9BYG8 508 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 FRMD8Q9BZ67 464 aaPredicted RBP17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 RP1P56715 2156 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 LAMA5O15230 3695 aa17.1■□□□□ 0.33
CACNA2D4-211ENST00000540728 TCEA3O75764 348 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 CEACAM5P06731 702 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 ABCG1P45844 678 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 PEX6Q13608 980 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 QPCTQ16769 361 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 ADAMTSL4Q6UY14 1074 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 KIAA1524Q8TCG1 905 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 SCAMP4Q969E2 229 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 DPEP2Q9H4A9 486 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 TRNAU1APQ9NX07 287 aaKnown RBP17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 SAE1Q9UBE0 346 aaPredicted RBP17.09■□□□□ 0.33
CACNA2D4-211ENST00000540728 hCG_1818297A0A087WSY0 165 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 A0A087WV48 116 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 RGSL1A5PLK6 1076 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 USP12O75317 370 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 MPOP05164 745 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 CETN2P41208 172 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 GNPDA1P46926 289 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 SPIDRQ14159 915 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 GALNT3Q14435 633 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 PRKD1Q15139 912 aaPredicted RBP17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 SLC14A2Q15849 920 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 PCSK7Q16549 785 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 ISXQ2M1V0 245 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 OGFOD3Q6PK18 319 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 DOK6Q6PKX4 331 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 LRRC69Q6ZNQ3 347 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 B4GALNT4Q76KP1 1039 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 KIAA1328Q86T90 577 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZC3H18Q86VM9 953 aaKnown RBP17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 LSMEM2Q8N112 164 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 HIC2Q96JB3 615 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 TEKT5Q96M29 485 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 BAG1Q99933 345 aaPredicted RBP17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 RIOK2Q9BVS4 552 aaKnown RBP17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 SUFUQ9UMX1 484 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 SLC17A4Q9Y2C5 497 aa17.08■□□□□ 0.32
CACNA2D4-211ENST00000540728 BTNL10A8MVZ5 291 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 B4DGG1 531 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 RRP8O43159 456 aaKnown RBP17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 TLX3O43711 291 aaPredicted RBP17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 IVLP07476 585 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 PTPN3P26045 913 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 ACTN2P35609 894 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 MARCKSL1P49006 195 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 SPINT3P49223 89 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 VAV2P52735 878 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 COPS2P61201 443 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 GABREP78334 506 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 CDK18Q07002 472 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 RAD9BQ6WBX8 426 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 GPR156Q8NFN8 814 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 GPBAR1Q8TDU6 330 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 CCDC74AQ96AQ1 378 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 SRPK1Q96SB4 655 aaKnown RBP17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 VAT1Q99536 393 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 CDH19Q9H159 772 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 FAM83DQ9H4H8 585 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZFYVE1Q9HBF4 777 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 RAD18Q9NS91 495 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 IMPACTQ9P2X3 320 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 IGSF10Q6WRI0 2623 aa17.07■□□□□ 0.32
CACNA2D4-211ENST00000540728 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 RCCD1A6NED2 376 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 HACD1B0YJ81 288 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 PMPCBO75439 489 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 ASMTLO95671 621 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 SOD1P00441 154 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 GLB1P16278 677 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 CTNNA1P35221 906 aaKnown RBP17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 POLD2P49005 469 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 C14orf28Q4W4Y0 310 aa17.06■□□□□ 0.32
CACNA2D4-211ENST00000540728 BBS12Q6ZW61 710 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms