RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CD320Q9NPF0 282 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 GIMAP2Q9UG22 337 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 PCDHA9Q9Y5H5 950 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 PTGDR2Q9Y5Y4 395 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 ACOX3O15254 700 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 MOCS2O96007 188 aaPredicted RBP12.27□□□□□ -0.45
NPC1-202ENST00000540608 CYP11A1P05108 521 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 FCGR1AP12314 374 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 STT3AP46977 705 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 FOXA1P55317 472 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 PURAQ00577 322 aaKnown RBP12.27□□□□□ -0.45
NPC1-202ENST00000540608 TIAL1Q01085 375 aaKnown RBP eCLIP12.27□□□□□ -0.451e-8■■□□□ 12.5
NPC1-202ENST00000540608 TMED1Q13445 227 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 IHHQ14623 411 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 TMTC4Q5T4D3 741 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 ZNF549Q6P9A3 640 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 SCD5Q86SK9 330 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 ITFG2Q969R8 447 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 NPLQ9BXD5 320 aaPredicted RBP12.27□□□□□ -0.45
NPC1-202ENST00000540608 AP5M1Q9H0R1 490 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 TUBB1Q9H4B7 451 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 DSEQ9UL01 958 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 CDH7Q9ULB5 785 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 FAF1Q9UNN5 650 aaPredicted RBP12.27□□□□□ -0.45
NPC1-202ENST00000540608 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
NPC1-202ENST00000540608 MIA3Q5JRA6 1907 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 J3KR12 359 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 ARPC2O15144 300 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 LDB2O43679 373 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 SIX3O95343 332 aaPredicted RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 SLC4A1P02730 911 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 CTSHP09668 335 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 SLC2A3P11169 496 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 GFAPP14136 432 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 HOXB8P17481 243 aaPredicted RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 SUOXP51687 545 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 MRPS6P82932 125 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 CTBSQ01459 385 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 DSC2Q02487 901 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 RPS6KA2Q15349 733 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 OR4D1Q15615 310 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 FSCN1Q16658 493 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 AGMOQ6ZNB7 445 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 DDIASQ8IXT1 998 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 RYBPQ8N488 228 aaPredicted RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 RHEBL1Q8TAI7 183 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 TSPEARQ8WU66 669 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 SEPT8Q92599 483 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 EXT2Q93063 718 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 C12orf43Q96C57 262 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 TUBGCP3Q96CW5 907 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 MUC3BQ9H195 1237 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 MUC13Q9H3R2 512 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 CHCHD3Q9NX63 227 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 OAZ3Q9UMX2 235 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 UBXN8O00124 270 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 TPST1O60507 370 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 VPS4BO75351 444 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 MTHFD2P13995 350 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 HGFP14210 728 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 IDO1P14902 403 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 OXTRP30559 389 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 SLC5A3P53794 718 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 YBX1P67809 324 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 PFKFB4Q16877 469 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
NPC1-202ENST00000540608 MIPOL1Q8TD10 442 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 HSPBAP1Q96EW2 488 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 HMCESQ96FZ2 354 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 TRIM54Q9BYV2 358 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 POPDC3Q9HBV1 291 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 POLG2Q9UHN1 485 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 KCTD3Q9Y597 815 aa12.26□□□□□ -0.45
NPC1-202ENST00000540608 LOC285095A0A1B0GVY8 99 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 SH3PXD2BA1X283 911 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 LRRC14BA6NHZ5 514 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TNFRSF10BO14763 440 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 GLP2RO95838 553 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TTKP33981 857 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ACVR1Q04771 509 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 MAPRE1Q15691 268 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 LYSMD3Q7Z3D4 306 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TEX26Q8N6G2 289 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 GPR150Q8NGU9 434 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 OR10T2Q8NGX3 314 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms