RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 WBP2Q969T9 261 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 ZNF641Q96N77 438 aaPredicted RBP10.15□□□□□ -0.78
SPARC-209ENST00000539687 ANKRD27Q96NW4 1050 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 LYSMD1Q96S90 227 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 SLC46A2Q9BY10 475 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 COG4Q9H9E3 785 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 TCF7L2Q9NQB0 619 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 RAD18Q9NS91 495 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 ARL8BQ9NVJ2 186 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 PNPOQ9NVS9 261 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 POLR3BQ9NW08 1133 aaPredicted RBP10.15□□□□□ -0.78
SPARC-209ENST00000539687 MARCH4Q9P2E8 410 aaPredicted RBP10.15□□□□□ -0.78
SPARC-209ENST00000539687 BAIAP2L1Q9UHR4 511 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 TRMT6Q9UJA5 497 aaKnown RBP10.15□□□□□ -0.78
SPARC-209ENST00000539687 HS3ST2Q9Y278 367 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 PCDHB9Q9Y5E1 797 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 PCDHGC4Q9Y5F7 938 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 SPO11Q9Y5K1 396 aa10.15□□□□□ -0.78
SPARC-209ENST00000539687 OAS3Q9Y6K5 1087 aaKnown RBP10.15□□□□□ -0.78
SPARC-209ENST00000539687 OBSL1O75147 1896 aa10.15□□□□□ -0.79
SPARC-209ENST00000539687 MYLKQ15746 1914 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 UBA6A0AVT1 1052 aaPredicted RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 CAPN8A6NHC0 703 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 A8MT66 165 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 ZNF195O14628 629 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 CCL16O15467 120 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 KERAO60938 352 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 SBK3P0C264 359 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 SPATA31D3P0C874 917 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 CD1DP15813 335 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 ZNF7P17097 686 aaPredicted RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 RPS3P23396 243 aaKnown RBP eCLIP10.14□□□□□ -0.798e-7■■■□□ 16
SPARC-209ENST00000539687 NNMTP40261 264 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 ABL2P42684 1182 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 RECQLP46063 649 aaPredicted RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 POLR2LP62875 67 aaKnown RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 HERVK_113P63132 956 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 MXRA7P84157 204 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 DLG1Q12959 904 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 TUBB3Q13509 450 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 ZNF460Q14592 562 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 HERC3Q15034 1050 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 GRAMD4Q6IC98 578 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 LINGO4Q6UY18 593 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 SPATA31D4Q6ZUB0 917 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 USP45Q70EL2 814 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 UBE2Q1Q7Z7E8 422 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 ISCA2Q86U28 154 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 AHI1Q8N157 1196 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 CCNYL1Q8N7R7 359 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 MDGA1Q8NFP4 955 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 SHKBP1Q8TBC3 707 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 SPPL3Q8TCT6 385 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 KIAA1191Q96A73 305 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 LBHD1Q9BQE6 289 aaPredicted RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 ERVK-6Q9BXR3 956 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 CPEB1Q9BZB8 566 aaKnown RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 ZNF395Q9H8N7 513 aaPredicted RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 ZFYVE1Q9HBF4 777 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 MAN1C1Q9NR34 630 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 MARK1Q9P0L2 795 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 IL17CQ9P0M4 197 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 GNPTGQ9UJJ9 305 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 CRYL1Q9Y2S2 319 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 FCF1Q9Y324 198 aaKnown RBP10.14□□□□□ -0.79
SPARC-209ENST00000539687 KCTD3Q9Y597 815 aa10.14□□□□□ -0.79
SPARC-209ENST00000539687 A0A0J9YYE9 177 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 OR51F1A6NGY5 319 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 B2RBV5 119 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 E5RI56 91 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 STX16O14662 325 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 AURKAO14965 403 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 GSC2O15499 205 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 GJB3O75712 270 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 POP4O95707 220 aaKnown RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 TRBC1P01850 177 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 SLC4A1P02730 911 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ASLP04424 464 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ENO1P06733 434 aaKnown RBP10.13□□□□□ -0.79
SPARC-209ENST00000539687 RHOP08100 348 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 PDHA1P08559 390 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 THRAP10827 490 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 SPAM1P38567 509 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 NUMBP49757 651 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 INHBCP55103 352 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 CDKN2DP55273 166 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ERVFC1P60507 584 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 IL2P60568 153 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 USP4Q13107 963 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ZRANB3Q5FWF4 1079 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 ZNF789Q5FWF6 425 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 NAPRTQ6XQN6 538 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 TPGS1Q6ZTW0 290 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 FRMD7Q6ZUT3 714 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 SNX20Q7Z614 316 aa10.13□□□□□ -0.79
SPARC-209ENST00000539687 RNF135Q8IUD6 432 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms