RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PAPSS1O43252 624 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SUV39H1O43463 412 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NRP2O60462 931 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 BMP6P22004 513 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CORO1AP31146 461 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 OR1D2P34982 312 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SLC20A2Q08357 652 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 POM121L1PQ3SYA9 428 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TREML2Q5T2D2 321 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 FAM171BQ6P995 826 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 C17orf64Q86WR6 236 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MAB21L3Q8N8X9 362 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SRFBP1Q8NEF9 429 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TRPM4Q8TD43 1214 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 KREMEN1Q96MU8 473 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 QKIQ96PU8 341 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 HIPK3Q9H422 1215 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ST6GALNAC4Q9H4F1 302 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PNPLA3Q9NST1 481 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF180Q9UJW8 692 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 LDOC1O95751 146 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 AP2A1O95782 977 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SNHG28P0DPA3 235 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF37AP17032 561 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ADRA1BP35368 520 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SPAM1P38567 509 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SF1Q15637 639 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NDUFA9Q16795 377 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PTCHD4Q6ZW05 846 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CFAP52Q8N1V2 620 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CCDC185Q8N715 623 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MTMR14Q8NCE2 650 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SLAIN1Q8ND83 568 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 INPP4AQ96PE3 977 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SEZ6LQ9BYH1 1024 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 LMAN2LQ9H0V9 348 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CLK4Q9HAZ1 481 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZDHHC4Q9NPG8 344 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GALNT8Q9NY28 637 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SLIT2O94813 1529 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 A0A0J9YYE9 177 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CCDC182A6NF36 153 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NEDD8-MDP1E9PL57 170 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PRMT5O14744 637 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 B4GALT5O43286 388 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CAPN15O75808 1086 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NFATC1O95644 943 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 C1RP00736 705 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CHRNGP07510 517 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SELPP16109 830 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GLUD2P49448 558 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NDUFV1P49821 464 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CACNG1Q06432 222 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ACAP2Q15057 778 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MON1BQ7L1V2 547 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TRABD2AQ86V40 505 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ADGRG2Q8IZP9 1017 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GJD3Q8N144 294 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 SFRP1Q8N474 314 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 DCUN1D5Q9BTE7 237 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GRIP2Q9C0E4 1043 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CRISPLD1Q9H336 500 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 AASDHPPTQ9NRN7 309 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PHPT1Q9NRX4 125 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GMIPQ9P107 970 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PPIEQ9UNP9 301 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 OGNP20774 298 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 NR1H2P55055 460 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TRAP1Q12931 704 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ITGADQ13349 1161 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MAPK11Q15759 364 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 DHDDSQ86SQ9 333 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ACBD6Q9BR61 282 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CCDC28BQ9BUN5 200 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CHKBQ9Y259 395 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MRPL42Q9Y6G3 142 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 BUD23O43709 281 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 OR10H3O60404 316 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PRKAR2AP13861 404 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 IGFALSP35858 605 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ABCG1P45844 678 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CDH4P55283 916 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MBTD1Q05BQ5 628 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 RGS21Q2M5E4 152 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZYG11AQ6WRX3 759 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TMPRSS11BQ86T26 416 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CACUL1Q86Y37 369 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TNS4Q8IZW8 715 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PLD4Q96BZ4 506 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 RCN3Q96D15 328 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 DHX33Q9H6R0 707 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 LRTM1Q9HBL6 345 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms