RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 F9P00740 461 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 FUT4P22083 530 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ELK4P28324 431 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ATP6V0D1P61421 351 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 HACD2Q6Y1H2 254 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 CROCCP3Q8IVE0 287 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 LRRC58Q96CX6 371 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ERLEC1Q96DZ1 483 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 CENPNQ96H22 339 aaPredicted RBP20.26■□□□□ 0.83
TMEM260-203ENST00000539559 NT5MQ9NPB1 228 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ZNHIT2Q9UHR6 403 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 NDUFAF1Q9Y375 327 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 TRIM64CA6NLI5 447 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ZBTB11O95625 1053 aaPredicted RBP20.26■□□□□ 0.83
TMEM260-203ENST00000539559 DNAJB2P25686 324 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 CD86P42081 329 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ACADVLP49748 655 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 RPS6KA2Q15349 733 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 C14orf80Q86SX3 495 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 KLHDC8BQ8IXV7 354 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 MIER2Q8N344 545 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 TNIP2Q8NFZ5 429 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 SGCDQ92629 289 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ZUFSPQ96AP4 578 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 VPS50Q96JG6 964 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 MYRFLQ96LU7 910 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 C9orf16Q9BUW7 83 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 FLRT1Q9NZU1 646 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 ABCD2Q9UBJ2 740 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 TREHO43280 583 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 F2P00734 622 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 LEPRP48357 1165 aaKnown RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 TRAF2Q12933 501 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 PLA2G4EQ3MJ16 856 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CYBRD1Q53TN4 286 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 NANOGP8Q6NSW7 305 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 TLK2Q86UE8 772 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CILP2Q8IUL8 1156 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 SLC22A9Q8IVM8 553 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 ZC3H7AQ8IWR0 971 aaKnown RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CLYBLQ8N0X4 340 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 LPPQ93052 612 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 FCRL2Q96LA5 508 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 POLR3BQ9NW08 1133 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 EVLQ9UI08 416 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 SH3GLB1Q9Y371 365 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 MAGED1Q9Y5V3 778 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 GFAPP14136 432 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 MATN1P21941 496 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 HMOX2P30519 316 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CLCN5P51795 746 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CDC42EP1Q00587 391 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 OR4D1Q15615 310 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 TFAP2DQ7Z6R9 452 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 DHRSXQ8N5I4 330 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 NUDT8Q8WV74 236 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 SEPT8Q92599 483 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 PABPC5Q96DU9 382 aaKnown RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 MTG1Q9BT17 334 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 LTB4R2Q9NPC1 389 aa20.25■□□□□ 0.83
TMEM260-203ENST00000539559 TUBA8Q9NY65 449 aaPredicted RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 NYNRINQ9P2P1 1898 aaKnown RBP20.25■□□□□ 0.83
TMEM260-203ENST00000539559 CASTOR2A6NHX0 329 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 AQP12BA6NM10 295 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 RASAL1O95294 804 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 ZNF865P0CJ78 1059 aaPredicted RBP20.24■□□□□ 0.83
TMEM260-203ENST00000539559 PRSS56P0CW18 603 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 EEF1B2P24534 225 aaKnown RBP20.24■□□□□ 0.83
TMEM260-203ENST00000539559 GSK3BP49841 420 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 POLD3Q15054 466 aaPredicted RBP20.24■□□□□ 0.83
TMEM260-203ENST00000539559 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 PAGE3Q5JUK9 113 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 AQP12AQ8IXF9 295 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 HASPINQ8TF76 798 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 RGS18Q9NS28 235 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 TBC1D23Q9NUY8 699 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 POLG2Q9UHN1 485 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 CORINQ9Y5Q5 1042 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 PIRTP0C851 137 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 NR4A1P22736 598 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 HERVK_113P63132 956 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 DSC2Q02487 901 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 GNA12Q03113 381 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 TGFBIQ15582 683 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 SLC44A4Q53GD3 710 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 HABP4Q5JVS0 413 aaKnown RBP20.24■□□□□ 0.83
TMEM260-203ENST00000539559 LCN8Q6JVE9 175 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 ABRAXAS1Q6UWZ7 409 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 IFNL1Q8IU54 200 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 PHYKPLQ8IUZ5 450 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 TRPV3Q8NET8 790 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 PLEKHA8Q96JA3 519 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 TMEM209Q96SK2 561 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 ERVK-6Q9BXR3 956 aa20.24■□□□□ 0.83
TMEM260-203ENST00000539559 SEMA4BQ9NPR2 832 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms